Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq2288 158 1e-36 seq445 95.1 1e-17 seq11326 87.8 2e-15 seq446 82.4 7e-14 >seq2288 Length=2140 Score = 158 bits (174), Expect = 1e-36 Identities = 95/100 (95%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 || || ||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 2041 GGCCGCAGAAACCAGGCCGCTGCGACTGTTTATCAAAAACACAGCACTCTGCAAACACGA 2100 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAA 146 ||||||||||||||||||||||||||||||||||| |||| Sbjct 2101 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCTGGAA 2140 >seq445 Length=5314 Score = 95.1 bits (104), Expect = 1e-17 Identities = 72/85 (85%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 |||||||||||| |||||||||| ||||||||| || ||| || |||||||| ||| Sbjct 3948 GCGACTGTTTATCAAAAACACAGGGCTCTGCAAAATCGTAAGATGAAGTATAGGGCCTGA 4007 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 | |||||||||||| |||||||||| Sbjct 4008 CACCTGCCCGGTGCTGGAAGGTTAA 4032 >seq11326 Length=344 Score = 87.8 bits (96), Expect = 2e-15 Identities = 51/53 (96%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 65 GCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTA 117 |||||||||||||| ||||||||||||||| |||||||||||||||||||||| Sbjct 53 GCTGCGACTGTTTAATAAAAACACAGCACTATGCAAACACGAAAGTGGACGTA 1 >seq446 Length=116643 Score = 82.4 bits (90), Expect = 7e-14 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 60 AGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATA 119 ||||| ||||||||||| ||||||||| || |||||| |||||| || ||||| Sbjct 4154 AGGCCCAGGCGACTGTTTAACAAAAACACATGGCTTTGCAAAATCGAAAGATGAAGTATA 4213 Query 120 GGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 || |||| |||||||||||| |||||||||| Sbjct 4214 AGGCCTGACACCTGCCCGGTGCTGGAAGGTTAA 4246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476738188542