Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq446 306 9e-81 seq445 269 7e-70 seq2288 250 6e-64 seq11326 149 2e-33 seq4 138 3e-30 seq3527 111 4e-22 seq3111 104 6e-20 seq1328 87.8 5e-15 >seq446 Length=116643 Score = 306 bits (338), Expect = 9e-81 Identities = 314/412 (76%), Gaps = 30/412 (7%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||| | || |||||||||||||||||| | ||||||||||| | ||||| Sbjct 4430 GCATCTTCACGGGGAATTCAATTTCACTGAGTCTGCGTTGGAGACAGCGGGGAAGTCGTT 4371 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4370 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 4311 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA--GCTAAC--CC 188 | |||||||||||||||||| ||||||||||| | |||||| ||| ||||| || Sbjct 4310 TAGTTACGGCCGCCGTTTACTGGGGCTTCGATTCAATGCTTCGGTTTAACCCTAACATCC 4251 Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248 | || |||||||||| |||||||||||| |||| || ||||| || |||||| ||| Sbjct 4250 CCTC--TTAACCTTCCAGCACCGGGCAGGTGTCAGGCCTTATACTTCATCTTTCGATTTT 4193 Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAG 308 ||| || ||||||||| ||||||||||| ||||| | || || | ||| Sbjct 4192 GCAAAGCCATGTGTTTTTGTTAAACAGTCGCCTGGGCCTTTTCACTGCGGC-----TGAT 4138 Query 309 CTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTT 368 || | ||| |||| ||||||||||||||||| | ||| || Sbjct 4137 ATTGC-------------------TACCAGCGCCCCTTCTCCCGAAGTTACAGGGCCATT 4097 Query 369 TTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCC 420 ||||| |||||||| || ||| ||| ||| |||| | ||||||| ||| Sbjct 4096 TTGCCGAGTTCCTTAGCCATGATTCACTCGAGCACCTTAGAATTCTCTTCCC 4045 >seq445 Length=5314 Score = 269 bits (298), Expect = 7e-70 Identities = 314/426 (74%), Gaps = 26/426 (6%) Strand=Plus/Minus Query 2 GCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCG-GGTGGAGACAGC 60 |||| || || |||||||||| | | | ||||||||| ||| ||| || ||||||| Sbjct 4225 GCGGGTAAACGGCATCTTCACCGTTACTACAATTTCACCGAG-CTCATGGCTGAGACAGT 4167 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | | |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4166 GTCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 4107 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| |||||||||||||||||| |||||||| || | ||||| | | Sbjct 4106 TTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCAATTCAATGCTTCTCCGAA 4047 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 | |||| | | |||||||||| |||||||||||| |||| |||||||| || ||| Sbjct 4046 GATAACATCTCCTCTTAACCTTCCAGCACCGGGCAGGTGTCAGGCCCTATACTTCATCTT 3987 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 || ||||||||| |||||||||| |||||||||||| | ||| | || || || Sbjct 3986 ACGATTTTGCAGAGCCCTGTGTTTTTGATAAACAGTCGCCTGGACCTTTTCACTGCGGCC 3927 Query 301 GGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACG 360 |||| ||| | |||| | ||||||||||||||| Sbjct 3926 AGCAT-TGCT-----------------------GCTGGCGACCTTTCTCCCGAAGTTACA 3891 Query 361 GTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCC 420 | | ||||||||| |||||| || |||||| ||| |||| | ||||||| | | Sbjct 3890 GGTCTATTTTGCCTAATTCCTTAGCCATGAATCTCTCGAGCACCTTAGGATTCTCTCCTC 3831 Query 421 AACCAC 426 ||| || Sbjct 3830 AACTAC 3825 >seq2288 Length=2140 Score = 250 bits (276), Expect = 6e-64 Identities = 193/227 (85%), Gaps = 3/227 (1%) Strand=Plus/Minus Query 201 TTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGT 260 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2140 TTCCAGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGT 2081 Query 261 GTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCT-TACGGAGCA 319 |||||| ||||||||||||||||||||||| ||| || || | | |||| || ||| Sbjct 2080 GTTTTTGATAAACAGTCGCAGCGGCCTGGTTTCTGCGGCCCTCTTCAGCTATAGCTCGCA 2021 Query 320 AGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTC 379 | | |||| | ||||||||||||||||||||||||||||| | ||||||||||| Sbjct 2020 TGAGC--CACCAAAAAGGGCGCACCTTCTCCCGAAGTTACGGTGCCATGTTGCCTAGTTC 1963 Query 380 CTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 |||| ||||||||||||||||||||| | |||||| || | |||| Sbjct 1962 CTTCACCCGAGTTCTCTCAAGCGCCTGAGAATTCTCATCCTACCCAC 1916 >seq11326 Length=344 Score = 149 bits (164), Expect = 2e-33 Identities = 147/188 (78%), Gaps = 3/188 (2%) Strand=Plus/Plus Query 230 TACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGG 289 |||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | Sbjct 1 TACGTCCACTTTCGTGTTTGCATAGTGCTGTGTTTTTATTAAACAGTCGCAGCCACCAGT 60 Query 290 TATCTTCGACCGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGC--ACCTTC 347 | | | ||| || | |||| || | ||| || ||||| || ||||| Sbjct 61 TTATTGCAACCCTTTCACCCTCATGGAGTAAACCAATCAAGCT-ACCGGGGCGTACCTTT 119 Query 348 TCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTG 407 ||||||||||||||| || |||||| ||||||||| |||||||||||||||||||||| Sbjct 120 TCCCGAAGTTACGGTACCAATTTGCCGAGTTCCTTCTCCCGAGTTCTCTCAAGCGCCTTA 179 Query 408 GTATTCTC 415 | || ||| Sbjct 180 GAATACTC 187 >seq4 Length=33404 Score = 138 bits (152), Expect = 3e-30 Identities = 191/267 (72%), Gaps = 8/267 (3%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||| | | ||||| |||| |||| ||||||||| | ||||| Sbjct 21775 GCATCTTCACGGAAAATTCAACTTCATTGAGATATTACTGGAGACAGTAGGGAAGTCGTT 21716 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 || |||||| |||| |||| || |||| |||||||||||||||||||||||||||||| | Sbjct 21715 ACACCATTCATGCACGTCGAAAATTACTCGACAAGGAATTTCGCTACCTTAGGACCGTCA 21656 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATC 192 ||||| |||||||||||| | | |||| || | | | || | || | || Sbjct 21655 AGGTTACAGCCGCCGTTTACTGAGACTTCAATTCGAAACAT---AATATTTCTCCTCTTC 21599 Query 193 AATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAG 252 | | || | | |||||||||| ||| |||||||| || || | ||||||| Sbjct 21598 ATT-----TTGCAGTACCGGGCAGGTATCAAGCCCTATACATCATATTACTATTTTGCAG 21544 Query 253 AGTGCTGTGTTTTTAATAAACAGTCGC 279 || |||||||||| ||||||||||| Sbjct 21543 AGCCCTGTGTTTTTGTTAAACAGTCGC 21517 >seq3527 Length=887 Score = 111 bits (122), Expect = 4e-22 Identities = 153/210 (73%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 219 GTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 |||| || ||||| || ||| || || ||| | ||||||||||| |||||||||| Sbjct 1 GTCAGTCCGTATACATCGTCTTGCGACTTGGCACGGACCTGTGTTTTTAGTAAACAGTCG 60 Query 279 CAGCGGCCTGGTATCTTCGACCGGCATGAGCTTACGG-AGCAAGTCCTTCACCCTCACCG 337 | | || || ||| || || || |||| ||| || || ||| | | | | Sbjct 61 CTACCCACTAGTCTCTGCGGCCTCCAAACGCTTTCGGGAGTAAATCCCTATACGCCGAAG 120 Query 338 GCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTT-CCCCCGAGTTCTCT 396 || | ||||||||||||||||||| | | ||||||| |||||||| || ||| |||||| Sbjct 121 GCCCCCCTTCTCCCGAAGTTACGGGGGCATTTTGCCGAGTTCCTTAACCACGA-TTCTCT 179 Query 397 CAAGCGCCTTGGTATTCTCTACCCAACCAC 426 | | | ||||||||||||||||| ||||| Sbjct 180 CGATCTCCTTGGTATTCTCTACCTGACCAC 209 >seq3111 Length=1418 Score = 104 bits (114), Expect = 6e-20 Identities = 149/209 (71%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 219 GTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 |||| || ||||| || ||| || || ||| | ||||||||||| |||||||||| Sbjct 1418 GTCAGTCCGTATACATCGTCTTACGACTTCGCACGGACCTGTGTTTTTAGTAAACAGTCG 1359 Query 279 CAGCGGCCTGGTATCTTCGACCGGCATGAGCTTACGGAGCAAGTC-CTTCACCCTCACCG 337 | | ||||| ||| || || |||| | || || | | ||||| | Sbjct 1358 CTTCTCACTGGTCTCTGCGGCCCCACCCAGCTCAGACAGTAAATGTCGTCACCAGACAGG 1299 Query 338 GCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTC 397 || | ||||||||||||||||||| | | ||||||| |||||||| || |||| |||| Sbjct 1298 GCCCCCCTTCTCCCGAAGTTACGGGGGCATTTTGCCGAGTTCCTTAACCATAGTTATCTC 1239 Query 398 AAGCGCCTTGGTATTCTCTACCCAACCAC 426 | |||||| |||||||||||| ||||| Sbjct 1238 GATCGCCTTAGTATTCTCTACCTGACCAC 1210 >seq1328 Length=80990 Score = 87.8 bits (96), Expect = 5e-15 Identities = 67/77 (87%), Gaps = 2/77 (3%) Strand=Plus/Plus Query 344 CTTCTCCCGAAGTTACG-GTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCG 402 ||||| ||||||||||| ||| | |||||| ||||||||| | |||||||||||||| Sbjct 85 CTTCTTCCGAAGTTACGCGTG-CAATTTGCCGAGTTCCTTCAACGCAGTTCTCTCAAGCG 143 Query 403 CCTTGGTATTCTCTACC 419 ||||||||||||||||| Sbjct 144 CCTTGGTATTCTCTACC 160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260631279744