Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq446 365 1e-98 seq445 360 4e-97 seq4 196 1e-47 seq3111 120 6e-25 seq3527 111 3e-22 seq2288 96.9 7e-18 >seq446 Length=116643 Score = 365 bits (404), Expect = 1e-98 Identities = 296/355 (83%), Gaps = 5/355 (1%) Strand=Plus/Minus Query 2 ACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAA 61 |||| |||||||||| |||| | ||||||||| |||||| | ||||||| | || Sbjct 4435 ACCCCGCATCTTCACGGGGAATTCAATTTCACTGAGTCTGCGTTGGAGACAGCGGGGAAG 4376 Query 62 TCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 121 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 4375 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 4316 Query 122 CGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATT--GCTCTAA 179 ||||||||||||||||||||||||||||||||| |||| ||||||| || | |||| Sbjct 4315 CGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCGATTCAATGCTTCGGTTTAACCCTAA 4256 Query 180 CAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGAC 239 || || |||||||||||||||||||||||| ||||| | ||||| || |||| ||| Sbjct 4255 CATCCCCTCTTAACCTTCCAGCACCGGGCAGGTGTCAGGCCTTATACTTCATCTTTCGAT 4196 Query 240 TTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCA 299 || ||| | | |||||||||| ||||||||||| ||||||| ||| |||||| ||| | Sbjct 4195 TTTGCAAAGCCATGTGTTTTTGTTAAACAGTCGCCTGGGCCTTTTCACTGCGG-CTGATA 4137 Query 300 TAG--ACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 | | || || ||||||||||| ||||||| ||| ||||||||||||||||||| Sbjct 4136 TTGCTACCAGCGCCCCTTCTCCCGAAGTTACAGGGCCATTTTGCCGAGTTCCTTA 4082 >seq445 Length=5314 Score = 360 bits (398), Expect = 4e-97 Identities = 291/350 (83%), Gaps = 3/350 (1%) Strand=Plus/Minus Query 5 CGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCG 64 |||||||||||||| | ||||||||||||||| || | |||||||||| ||| |||| Sbjct 4216 CGGCATCTTCACCGTTACTACAATTTCACCGAGCTCATGGCTGAGACAGTGTCCAGATCG 4157 Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124 |||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 4156 TTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 4097 Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGAT 184 |||||||||||||||||||||||||||||| | |||| |||||| ||||| | Sbjct 4096 TATAGTTACGGCCGCCGTTTACTGGGGCTTCAATTCAATGCTTCTCCGAAGATAACATCT 4037 Query 185 CCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGC 244 || |||||||||||||||||||||||| ||||| ||||||| || |||| ||| || || Sbjct 4036 CCTCTTAACCTTCCAGCACCGGGCAGGTGTCAGGCCCTATACTTCATCTTACGATTTTGC 3977 Query 245 AGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAG-- 302 ||| |||||||||||| ||||||||||| ||| ||| ||| |||||||| | ||| | Sbjct 3976 AGAGCCCTGTGTTTTTGATAAACAGTCGCCTGGACCTTTTCACTGCGGCCAG-CATTGCT 3918 Query 303 ACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 | ||| || ||||||| ||||||| || |||||||| | ||||||| Sbjct 3917 GCTGGCGACCTTTCTCCCGAAGTTACAGGTCTATTTTGCCTAATTCCTTA 3868 >seq4 Length=33404 Score = 196 bits (216), Expect = 1e-47 Identities = 254/346 (73%), Gaps = 14/346 (4%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTG-AGACAGTGCCCAAATCGT 65 |||||||||| | | | ||| |||| ||| |||| || ||||||| || |||| Sbjct 21775 GCATCTTCACGGAAAATTCAACTTCATTGAGA-TATTACTGGAGACAGTAGGGAAGTCGT 21717 Query 66 TACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 125 ||| || ||| ||| |||| || |||| |||||||||||||||||||||||||||||| Sbjct 21716 TACACCATTCATGCACGTCGAAAATTACTCGACAAGGAATTTCGCTACCTTAGGACCGTC 21657 Query 126 ATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATC 185 | ||||| |||||||||||||| | ||| | ||| | | || || || Sbjct 21656 AAGGTTACAGCCGCCGTTTACTGAGACTTCAATTCGAAACAT-AATATTTC-------TC 21605 Query 186 CCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCA 245 | ||| | || ||| |||||||||| ||| |||||||||| | || | | || ||| Sbjct 21604 CTCTTCATTTTGCAGTACCGGGCAGGTATCAAGCCCTATACATCATATTACTATTTTGCA 21545 Query 246 GAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAGACA 305 || |||||||||||| |||||||||||| |||||| ||| | ||| | | | | Sbjct 21544 GAGCCCTGTGTTTTTGTTAAACAGTCGCTACCCCCTATTTTCT-AGACCT---AAAAAAA 21489 Query 306 GGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTT 351 || || | || |||| ||||||| | |||||||||||||||||||| Sbjct 21488 GGTACTCTTTATCCCGAAGTTACAGAGTCATTTTGCCGAGTTCCTT 21443 >seq3111 Length=1418 Score = 120 bits (132), Expect = 6e-25 Identities = 131/178 (74%), Gaps = 26/178 (15%) Strand=Plus/Minus Query 213 GTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCG 272 ||||| | ||||||||||||| |||||| ||| |||||||||||| ||||||||||| Sbjct 1418 GTCAGTCCGTATACATCGTCTTACGACTTCGCACGGACCTGTGTTTTTAGTAAACAGTCG 1359 Query 273 CTTGGGCCTATTCTCTGCGGCC---------------------TGTCAT----AGACAGG 307 ||| || ||||||||||| |||| | ||||||| Sbjct 1358 CTTCTCACTGGTCTCTGCGGCCCCACCCAGCTCAGACAGTAAATGTCGTCACCAGACAGG 1299 Query 308 -CACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGTTCTC 364 | ||||||||||| ||||||||||| ||||||||||||||||||||| |||||| || Sbjct 1298 GCCCCCCTTCTCCCGAAGTTACGGGGGCATTTTGCCGAGTTCCTTAACCATAGTTATC 1241 >seq3527 Length=887 Score = 111 bits (122), Expect = 3e-22 Identities = 123/168 (73%), Gaps = 26/168 (15%) Strand=Plus/Plus Query 213 GTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCG 272 ||||| | |||||||||||||||||||| ||| |||||||||||| ||||||||||| Sbjct 1 GTCAGTCCGTATACATCGTCTTGCGACTTGGCACGGACCTGTGTTTTTAGTAAACAGTCG 60 Query 273 CTTGGGCCTATTCTCTGCGGCCT----------------GT-----CATAGAC-----AG 306 || ||| |||||||||||| || | || || || Sbjct 61 CTACCCACTAGTCTCTGCGGCCTCCAAACGCTTTCGGGAGTAAATCCCTATACGCCGAAG 120 Query 307 GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAAC 354 || ||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct 121 GCCCCCCTTCTCCCGAAGTTACGGGGGCATTTTGCCGAGTTCCTTAAC 168 >seq2288 Length=2140 Score = 96.9 bits (106), Expect = 7e-18 Identities = 136/194 (70%), Gaps = 24/194 (12%) Strand=Plus/Minus Query 195 TTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGT 254 |||||||||||||||||||||| ||||||| || ||| || || ||||| |||| Sbjct 2140 TTCCAGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGT 2081 Query 255 GTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGC---------------CTGTCA 299 ||||||| ||||||||||| ||||| | |||||||| || || Sbjct 2080 GTTTTTGATAAACAGTCGCAGCGGCCTGGTTTCTGCGGCCCTCTTCAGCTATAGCTCGCA 2021 Query 300 T-AGACA--------GGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCT 350 | || || ||| | ||||||||| ||||||||| | ||| ||||| ||||||| Sbjct 2020 TGAGCCACCAAAAAGGGCGCACCTTCTCCCGAAGTTACGGTGCCATGTTGCCTAGTTCCT 1961 Query 351 TAACAATAGTTCTC 364 | || ||||||| Sbjct 1960 TCACCCGAGTTCTC 1947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062257829632