Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq1328 529 5e-148 seq2185 515 1e-143 seq446 417 2e-114 seq445 417 2e-114 seq3574 289 9e-76 seq4 174 5e-41 seq6490 102 2e-19 >seq1328 Length=80990 Score = 529 bits (586), Expect = 5e-148 Identities = 425/505 (84%), Gaps = 16/505 (3%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| || |||||||||||||||||||||| ||||||||||||||||||||| Sbjct 3339 TACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 3280 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 ||||||||||||||||||||||| |||||||||||| |||||||||| || | | Sbjct 3279 GTGGTTTAATTCGAAGCAACGCGCAGAACCTTACCAGCCCTTGACATCCC--GATCGCGG 3222 Query 121 T----AGAGATAGAGGTTTCCCC---TTCGGG-GGACAGAGTGACAGGTGATGCATGGTT 172 | |||||| ||||||| || || ||| | |||||||||| ||||||| | Sbjct 3221 TTACCAGAGAT---GGTTTCCTTCAGTTAGGCTGGATCG-GTGACAGGTGCTGCATGGCT 3166 Query 173 GTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGC 232 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 3165 GTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGCCC 3106 Query 233 TTAGTTGCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCG-GAGGAA 291 ||||||||||||||| |||||||||||||||| |||||||||||| || ||| |||||| Sbjct 3105 TTAGTTGCCATCATTCAGTTGGGCACTCTAAGGGGACTGCCGGTGATAAGCCGAGAGGAA 3046 Query 292 GGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAAT 351 |||||||| |||||||| || ||||| |||||| | |||||||||||||||||||||| Sbjct 3045 GGTGGGGATGACGTCAAGTCCTCATGGCCCTTACGGGCTGGGCTACACACGTGCTACAAT 2986 Query 352 GGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAG 411 || ||| ||||||||| ||||||||||| ||| |||| | |||| |||||| Sbjct 2985 GGTGGTGACAGTGGGCAGCGAGACCGCGAGGTCGAGCTAATCTCCAAAAG-CCATCTCAG 2927 Query 412 TTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCA 471 ||||||||| | |||||||||||| | |||||| ||||||||||||||||||| ||||| Sbjct 2926 TTCGGATTGCACTCTGCAACTCGAGTGCATGAAGTTGGAATCGCTAGTAATCGTGGATCA 2867 Query 472 GCATGCTACGGTGAATACGTTCCCG 496 | |||| |||||||||||||||||| Sbjct 2866 GAATGCCACGGTGAATACGTTCCCG 2842 >seq2185 Length=1414 Score = 515 bits (570), Expect = 1e-143 Identities = 419/501 (84%), Gaps = 9/501 (2%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||||| | |||||||||||||||||||||||||||||||||||| ||||||| Sbjct 885 TACGGCCGCAAGGCTAAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGCGGAGCAT 826 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 | || ||||||||| |||||||||||||||||||| ||||||||| || | || Sbjct 825 GCGGATTAATTCGATGCAACGCGAAGAACCTTACCTGGTCTTGACATGTCGAGAACTTTC 766 Query 121 TAGAGATAGA--GGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTC 178 |||||| || ||| |||||||| || ||||||| ||||||| ||||||| Sbjct 765 CAGAGATGGATTGGTG---CCTTCGGGAACTCGAAC-ACAGGTGCTGCATGGCTGTCGTC 710 Query 179 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTT 238 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 709 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCCTTAGTT 650 Query 239 GCCATCAT-TAA-GTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGG 296 |||| || ||| | |||| |||||||| ||| |||||||||||||||||||||||||| Sbjct 649 GCCAGCACGTAATGGTGGGAACTCTAAGGAGACCGCCGGTGACAAACCGGAGGAAGGTGG 590 Query 297 GGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACA 356 ||| |||||||| |||||||| |||||| || ||||||||||||| ||||||||| Sbjct 589 GGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTACTACAATGGTAG 530 Query 357 ATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGG 416 ||| ||||| || || |||||||| ||||| ||||||| ||| ||||||| ||| Sbjct 529 GGACAGAGGGCTGCAAACCCGCGAGGGCAAGCCAATCCCAGAAACCCTATCTCAGTCCGG 470 Query 417 ATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCA-T 475 |||| |||||||||||||||| |||||| ||||||||||||||||| ||||||||| | Sbjct 469 ATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCAGATCAGCATT 410 Query 476 GCTACGGTGAATACGTTCCCG 496 ||| ||||||||||||||||| Sbjct 409 GCTGCGGTGAATACGTTCCCG 389 >seq446 Length=116643 Score = 417 bits (462), Expect = 2e-114 Identities = 399/502 (79%), Gaps = 13/502 (3%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1195 TACGCCCGCAAGGGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 1254 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| | |||||| |||||||||| ||||| | ||| || Sbjct 1255 GTGGTTTAATTCGATGATACGCGAGGAACCTTACCCGGGCTTGAAAGTTAGTGAATGATC 1314 Query 121 TAGAGATAGAGGTTTCCCCT-TCGGGGGACAGAGTGAC-AGGTGATGCATGGTTGTCGTC 178 |||||||||| | | || ||| | || ||||| ||||||| ||||||| Sbjct 1315 TAGAGATAGATCAGTGAGCAATC-----ACAC-GAAACTAGGTGCTGCATGGCTGTCGTC 1368 Query 179 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTT 238 |||||||| |||||| |||||||||||||||||||||||||||||||| || | |||||| Sbjct 1369 AGCTCGTGCCGTGAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTATGTTTAGTT 1428 Query 239 GCCATCA--TTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCG-GAGGAAGGTG 295 |||| || ||||| |||| ||||||| ||||||| ||| ||||| | |||||||| | Sbjct 1429 GCCAGCACGTTAAGGTGGGGACTCTAAACAGACTGCCTGTG-CAAACAGAGAGGAAGGAG 1487 Query 296 GGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGAC 355 ||||||||||||| |||||||| |||||| | |||||||||||||||||||||||| Sbjct 1488 GGGACGACGTCAAGTCATCATGGCCCTTACGTCCGGGGCTACACACGTGCTACAATGGAT 1547 Query 356 AATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCG 415 |||| |||||||| | || | ||||| |||| || |||| ||| ||||||| Sbjct 1548 GGTACAGAGGGCAGCAAGCTGGCAACAGCAAGCGAATCTCAAAAAGCCATTCACAGTTCG 1607 Query 416 GATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGC-A 474 ||| | |||||||||||||| ||||| |||| ||||||||||||| |||||| | Sbjct 1608 GATAGAGGTCTGCAACTCGACCTCTTGAAGTTGGATTCGCTAGTAATCGCGTATCAGCAA 1667 Query 475 TGCTACGGTGAATACGTTCCCG 496 || ||||||||||||||||| Sbjct 1668 TGACGCGGTGAATACGTTCCCG 1689 >seq445 Length=5314 Score = 417 bits (462), Expect = 2e-114 Identities = 402/504 (80%), Gaps = 19/504 (4%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 ||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1013 TACGAACGCAAGTTTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 1072 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCC--TCTGACCCC 118 |||||||||||||| | |||||| |||||||||||| ||| | || | |||||| Sbjct 1073 GTGGTTTAATTCGATGATACGCGAGGAACCTTACCAAGGCTT-AAATGCAGACTGACCGA 1131 Query 119 TCTAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTC 178 | | || | ||| | |||| ||||| | ||||| ||||||||||||||| Sbjct 1132 TTTGGAAACAGA------TCTTTCGCAAGACAGTTTACAAGGTGCTGCATGGTTGTCGTC 1185 Query 179 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTT 238 |||||||| |||||| ||| |||||||||| |||||||||||||| | |||||| Sbjct 1186 AGCTCGTGCCGTGAGGTGTCAGGTTAAGTCCTATAACGAGCGCAACCCCTGTTGTTAGTT 1245 Query 239 GCCATC-ATTA-AGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCG-GAGGAAGGTG 295 |||| | | || || ||| ||||||| ||||||| ||| ||||| | |||||||||| Sbjct 1246 GCCAGCGAGTAGTGTCGGGAACTCTAACAAGACTGCCAGTG-CAAACTGTGAGGAAGGTG 1304 Query 296 GGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGAC 355 |||| ||||||||||||||| | |||||| | ||||||||||||||||||||||||| | Sbjct 1305 GGGATGACGTCAAATCATCACGGCCCTTACGCCTTGGGCTACACACGTGCTACAATGGCC 1364 Query 356 AATACAAAGGGCAGCGAAACCGCGAGGTCA--AGCAAATCCCATAAAGTTGTTCTCAGTT 413 |||| || ||||| || | | | || ||| ||| | |||||| | || ||||| Sbjct 1365 GGTACAGAGAGCAGC--CACTGGGTGACCAGGAGCGAAT-CTATAAAGCCGGTCACAGTT 1421 Query 414 CGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG- 472 ||||| | |||||||||||||||| |||||||||||||||||||||||| | ||||| Sbjct 1422 CGGATCGGAGTCTGCAACTCGACTCCGTGAAGCTGGAATCGCTAGTAATCGGATATCAGC 1481 Query 473 CATGCTACGGTGAATACGTTCCCG 496 |||| | ||||||||||||||||| Sbjct 1482 CATGATCCGGTGAATACGTTCCCG 1505 >seq3574 Length=683 Score = 289 bits (320), Expect = 9e-76 Identities = 247/297 (83%), Gaps = 7/297 (2%) Strand=Plus/Plus Query 205 AGTCCCGCAACGAGCGCAACCCTTAAGCTTA-GTTGCCATCA--TTAAGTTGGGCACTC- 260 |||||||||||||||||||||| || |||| ||||||| || ||| | |||| |||| Sbjct 1 AGTCCCGCAACGAGCGCAACCCCTAT-CTTATGTTGCCAGCACGTTATGGTGGGGACTCG 59 Query 261 TAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCC 320 |||| ||||||||| | ||| ||||||||||||||||||||||||| ||||||||||| Sbjct 60 TAAGA-GACTGCCGGGGTCAACTCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGCCC 118 Query 321 CTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGA 380 |||||| ||||| ||||| ||||||||||| || |||| ||||| |||| |||| || Sbjct 119 CTTATGTCCAGGGCTTCACACATGCTACAATGGCCAGTACAGAGGGCTGCGAGACCGTGA 178 Query 381 GGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATA 440 ||| ||| |||||| ||||| || ||||||||||||| | |||||||||||||| Sbjct 179 GGTGGAGCGAATCCCTTAAAGCTGGTCTCAGTTCGGATCGGGGTCTGCAACTCGACCCCG 238 Query 441 TGAAGCTGGAATCGCTAGTAATCGTAGATCAGC-ATGCTACGGTGAATACGTTCCCG 496 ||||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||||| Sbjct 239 TGAAGTCGGAGTCGCTAGTAATCGCAGATCAGCAACGCTGCGGTGAATACGTTCCCG 295 >seq4 Length=33404 Score = 174 bits (192), Expect = 5e-41 Identities = 338/496 (68%), Gaps = 25/496 (5%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 ||||| |||||| || |||||||||||||||||||| || || ||||| ||||||||| Sbjct 14782 TACGATCGCAAGATTAAAACTCAAAGGAATTGACGGAGATTTGCGCAAGCAGTGGAGCAT 14841 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCC--TCTGACCCC 118 | ||||||||||| ||| |||| || |||||||| |||| ||| | | | Sbjct 14842 GAAGTTTAATTCGATATAACACGAAAAATCTTACCAATCTTTGA-ATCAAGTATATAAAC 14900 Query 119 TCTAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGT----GACAGGTGATGCATGGTTGT 174 | | || ||| || ||| | || |||||| | ||||||||||| Sbjct 14901 TTT---GAAAGATGTAAAATGTTCAAAAGTATAAGCTTAAGACAGGAGCTGCATGGTTGT 14957 Query 175 CGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTT 234 |||||| ||||| || | ||| |||||| ||| | ||| ||||| ||||| || Sbjct 14958 CGTCAGTTCGTGCTGTAAAGTGTAAGGTTAATTCCTTGATCGAACGCAATCCTTATATTT 15017 Query 235 AGTTGCCATCA--TTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAG 292 | || | || | |||| | | | ||| || | || ||||| Sbjct 15018 AATTACTATAAAATTAAATAGCTGAAAATAACACGATTTACGT------------GGAAG 15065 Query 293 GTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATG 352 || ||| || |||||||| ||| || | || |||||||||| ||||||||| | Sbjct 15066 TTGAGGATGATGTCAAATCGGTATGGCCTTAATAGATTGGGCTACATTTGTGCTACAACG 15125 Query 353 GACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGT 412 | || ||||| || ||||||| | ||| | || ||||| | ||| || ||| ||| Sbjct 15126 GTTAAAACAAAAGGAAGCGAAAGTGAGAGCTGGTGCTAATCCTAAAAA-TTAATCTTAGT 15184 Query 413 TCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG 472 | ||||||| |||| ||||||| | ||||| |||||| |||||||||||||||| || Sbjct 15185 TTGGATTGTTTTCTGAAACTCGAAAACATGAAAGTGGAATTGCTAGTAATCGTAGATTAG 15244 Query 473 CATGCTACGGTGAATA 488 | ||| ||||||||| Sbjct 15245 TACGCTTCGGTGAATA 15260 >seq6490 Length=913 Score = 102 bits (112), Expect = 2e-19 Identities = 144/201 (72%), Gaps = 1/201 (0%) Strand=Plus/Plus Query 288 GGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTA 347 || || || ||| || ||||| ||| ||| ||||||| ||||| | | || || Sbjct 14 GGTAGTTGAGGAAGATGTCAAGTCAGTATGGCCCTTATAGGAGGGGCTTGAAATGTAATA 73 Query 348 CAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTC 407 |||||| |||||| || ||||||| || || | |||||| || | |||| | | Sbjct 74 CAATGGTTTCTACAAAAGGAAGCGAAAGTGCAAGCTGGAGCAAAACCTAAAAAGAAAT-C 132 Query 408 TCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAG 467 | |||| ||||| |||||||||||| ||||| ||||| |||||||||||||| Sbjct 133 TTAGTTTGGATTTATTTCTGCAACTCGAAATAATGAAAGCGGAATTGCTAGTAATCGTAG 192 Query 468 ATCAGCATGCTACGGTGAATA 488 |||| | ||| ||||||||| Sbjct 193 ATCATAAGGCTTCGGTGAATA 213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503798734720