Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq371 131 3e-28 >seq371 Length=13317 Score = 131 bits (144), Expect = 3e-28 Identities = 99/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| ||||||||| ||||||||| ||||| ||||||| ||| ||||||||||||||||| Sbjct 5067 CTAGTTAGCAGGTCGAGGTCTCGTCCGTTACCGGAATTGACCTGACAAATCACTCCACCA 5008 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||| |||||||||||||| || |||| |||||| || | | |||||| Sbjct 5007 ACTAAGAACGACCATGCACCACCACTTATGCGATCATGAAAGATCTTTTAGTCTGTC 4951 Score = 98.7 bits (108), Expect = 2e-18 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 || |||||| ||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct 5276 CATTGTAGCACGCGTGCGGCCCAAGATATCTAAGGGCATCACAGACCTGTTATTGCCTCG 5217 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 |||||| || |||| ||||||||||||||| Sbjct 5216 GACTTCCTCCAACTTAAAGCTGGAAGTCCCTCTAAGAAG 5178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796696704342