Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq371 306 6e-81 seq445 78.8 2e-12 >seq371 Length=13317 Score = 306 bits (338), Expect = 6e-81 Identities = 217/247 (88%), Gaps = 5/247 (2%) Strand=Plus/Minus Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95 || || ||||||||||||||||||| |||||||||||||||||||||||||| | |||| Sbjct 9991 AGGAGTGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCTTGTTAGA 9932 Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155 |||||||||||||||| ||| |||||||||||||| |||||| ||||||||||||||| Sbjct 9931 GGGTGAACAATCCAACACTTTGCGAATTCTGCTTCGCAATGATAAGAAGAGCCGACATCG 9872 Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215 |||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 9871 AAGGATCAAAAAGCTACGTCGCTATGAGCGCTTGGCAGCCACAAGCCAGTTATCCCTGTG 9812 Query 216 GTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG--AGGGACTAAAGGATCGATAGGCCA 273 |||||||||||| |||||| | | ||| | || ||| | |||||||||||||||| Sbjct 9811 GTAACTTTTCTGACACCTCCACCACCAAGTCACGGTAGG---TGAAGGATCGATAGGCCA 9755 Query 274 CACTTTC 280 | ||||| Sbjct 9754 CGCTTTC 9748 >seq445 Length=5314 Score = 78.8 bits (86), Expect = 2e-12 Identities = 123/175 (70%), Gaps = 6/175 (3%) Strand=Plus/Minus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| ||| |||||||||| ||| || ||| |||| ||||| ||||| Sbjct 4772 CTGTCTCACGACGTTCTGAACCCAGCTCGCGTGCCACTTTAATGGGCGAACAGCCCAACC 4713 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| ||| |||| | | | ||| || ||||||||||||| | |||| | Sbjct 4712 CTTGGGACC---TTCTCCAGCCCCAGGATGTGACGAGCCGACATCGAGGTGCCAAACCCC 4656 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| ||||| | ||||| | | |||| |||||||| | ||| ||||| Sbjct 4655 CCCGTCGATATGAGCTCTTGGGGGAGATCAGCCTGTTATCCCCGGCGTACCTTTT 4601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854285664192