Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq5478 183 6e-44 seq446 183 6e-44 seq445 183 6e-44 seq2403 141 2e-31 seq4 102 2e-19 seq1960 93.3 8e-17 seq6402 84.2 4e-14 >seq5478 Length=225 Score = 183 bits (202), Expect = 6e-44 Identities = 172/219 (79%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 ||||||||| | | ||| ||||| ||||||||||| |||||||||| |||||||||||| Sbjct 7 GGGACAGTGCCTGGTGGGTAGTTTAACTGGGGCGGTTGCCTCCCAAAAAGTAACGGAGGC 66 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230 |||||||| | |||||| | ||| ||| || || | | |||| || ||| ||||| | Sbjct 67 GCCCAAAGGTTCCCTCAACCTGGTTGGCAATCAGGTGTCGAGTGTAAGTGCACAAGGGAG 126 Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290 ||||||| || || || ||| ||||||||||||||||||| || ||||||||| || Sbjct 127 CTTGACTGTGAGACTGACAGGTCGAGCAGGGACGAAAGTCGGGACTAGTGATCCGGCAGT 186 Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTAC 329 | ||||| || ||||||| ||||||||||| ||| Sbjct 187 GGCTTGTGGAAGCGCTGTCGCTCAACGGATAAAAGGTAC 225 >seq446 Length=116643 Score = 183 bits (202), Expect = 6e-44 Identities = 199/263 (76%), Gaps = 1/263 (0%) Strand=Plus/Plus Query 77 TGGATTTCTAACCGGACGACGTATAACCGTTGACGGGACAGTGTCAGTCGGGCAGTTTGA 136 ||||| |||||||| ||| || ||| ||||||||||| | ||| ||||||| Sbjct 4583 TGGATGTCTAACCGCGGTCCGT-TATCCGGATCCGGGACAGTGTATGGTGGGTAGTTTGA 4641 Query 137 CTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATG 196 ||||||||||||||||| |||||||||||||||||| | | | | ||||| || | Sbjct 4642 CTGGGGCGGTCGCCTCCTAAAGAGTAACGGAGGCGCGCGATGGTGGGCTCAGACCGGTCG 4701 Query 197 GAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAG 256 |||| | || ||||||| |||| ||| | ||||||||| || |||||| || Sbjct 4702 GAAATCGGTCGTCGAGTGCAATGGCATAAGCCCGCCTGACTGCGAGACTGACAAGTCGAG 4761 Query 257 CAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGAC 316 ||| |||||||||||| | || |||||||| ||| | | ||||| |||| |||||| || Sbjct 4762 CAGAGACGAAAGTCGGTCATAGTGATCCGGTGGTCCCGCGTGGAAGGGCCATCGCTCAAC 4821 Query 317 GGATAAAAGCTACCCTGGGGATA 339 ||||||||| ||| | ||||||| Sbjct 4822 GGATAAAAGGTACGCCGGGGATA 4844 >seq445 Length=5314 Score = 183 bits (202), Expect = 6e-44 Identities = 169/214 (79%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 126 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCT 185 ||| ||||||||||||| |||||||||| |||||||||||||||| | |||| | |||| Sbjct 4406 GGGTAGTTTGACTGGGGTGGTCGCCTCCAAAAGAGTAACGGAGGCTTCTAAAGGTTCCCT 4465 Query 186 CAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACC 245 ||| | ||| |||| |||| | ||||||| |||| ||||| | ||||||| || || Sbjct 4466 CAGTACGCTTGGTAACCGTGCGTAGAGTGCAATGGCATAAGGGAGCTTGACTGAGAGACA 4525 Query 246 CTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGC 305 || ||| | |||| |||||||| | || || |||||||| ||| | | |||||| ||| Sbjct 4526 TACAGGTCGATCAGGTACGAAAGTAGAGCATAGTGATCCGGTGGTTCCGCATGGAAGGGC 4585 Query 306 CGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | |||||| | ||||||||| ||| | ||||||| Sbjct 4586 CATCGCTCAAAGGATAAAAGGTACGCCGGGGATA 4619 >seq2403 Length=443 Score = 141 bits (156), Expect = 2e-31 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 127 GGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTC 186 || ||||||||||||| |||||||||| ||| ||||||||||| ||||| || ||| Sbjct 196 GGTAGTTTGACTGGGGTGGTCGCCTCCAAAAAGGTAACGGAGGCTTTCAAAGGTAAGCTC 255 Query 187 AGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCC 246 | | ||| |||| | | ||||||| ||| ||| || ||||||| || | Sbjct 256 AATACGCTTGGTAACCGTATGAGGAGTGCAATAGCATAAGCTTGCTTGACTGTGAGGCAG 315 Query 247 TCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCC 306 |||| | ||||||| |||||| ||| || |||||||| ||| ||| |||||| |||| Sbjct 316 ACAAGCCGAGCAGGGTCGAAAGACGGATATAGTGATCCGGTGGTTCTGCATGGAAGGGCC 375 Query 307 GTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 |||||| | ||||||||| ||| | ||||||| Sbjct 376 ATCGCTCAAAGGATAAAAGGTACGCCGGGGATA 408 >seq4 Length=33404 Score = 102 bits (112), Expect = 2e-19 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 127 GGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTC 186 || ||||||||||||| |||||||||||||||||||||||||| | ||||| || | Sbjct 21961 GGTAGTTTGACTGGGGTGGTCGCCTCCCAAAGAGTAACGGAGGTGTACAAAGGTAAATTT 22020 Query 187 AGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCC 246 || || || || | ||| || |||||||| || ||||||| | | Sbjct 22021 AGATT-AATTTTCTTAATCTTAAAAGTATAATGGCAAAAGTTTGCTTGACTGAAAGATAT 22079 Query 247 TCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCC 306 ||| || | ||| |||||||||||| | || |||||||| | ||| ||||| || Sbjct 22080 ACAAATCGATCAGAGACGAAAGTCGGTCATAGTGATCCGGTAATACTGTGTGGAAAGGTT 22139 Query 307 GTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 |||| ||||||||||| ||| || |||||| Sbjct 22140 ACCGCT-AACGGATAAAAGGTACGCTAGGGATA 22171 >seq1960 Length=1006 Score = 93.3 bits (102), Expect = 8e-17 Identities = 110/147 (75%), Gaps = 4/147 (3%) Strand=Plus/Minus Query 150 CTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCA 209 |||| ||||||||||||||| || | ||| ||| |||||| || ||| | | ||||| Sbjct 1006 CTCCTAAAGAGTAACGGAGGAGCTCGAAGGTACGCTCAGCGCGGTCGGACATC--GCGCA 949 Query 210 CAGTG--CAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAA 267 | ||| |||||||| ||| ||| |||||||| | | | | || |||||| | |||| Sbjct 948 CTGTGTGCAAAGGCATAAGCGTGCTTGACTGCAAGATCGACGGATCAAGCAGGTAGGAAA 889 Query 268 GTCGGGCTTAATGATCCGGCGGTGCTG 294 | || |||| |||||||| ||| ||| Sbjct 888 CTAGGACTTAGTGATCCGGTGGTTCTG 862 >seq6402 Length=269 Score = 84.2 bits (92), Expect = 4e-14 Identities = 145/207 (70%), Gaps = 3/207 (1%) Strand=Plus/Plus Query 125 CGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCC 184 |||| ||||||||||||||||| ||| | ||||||||||| ||| | |||| || | Sbjct 62 CGGGTAGTTTGACTGGGGCGGTAACCTTCTAAAGAGTAACGAAGGTGTATAAAGGTAAAC 121 Query 185 TCAGCTTGGA-TGG-AAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGAC 242 ||| | | ||| | || | | |||| || |||| ||| || ||||||| | Sbjct 122 TCAAAATAAACTGGTTAGTTATTTGGAGAGTGTAATGGCATAAGTTTGCTTGACTGAAAG 181 Query 243 ACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAAC 302 ||| |||||| | ||| |||| |||| | | || |||||| || ||| ||||| Sbjct 182 ACCTACAAGTCGATCAGAGACGCAAGTTGATCATAGTGATCCAATAGTTCTGTGTGGAAA 241 Query 303 GGCCGTCGCTCGACGGATAAAAGCTAC 329 ||| | ||| ||||||||||| ||| Sbjct 242 GGCTATTGCT-AACGGATAAAAGGTAC 267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982268535232