Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq445 196 5e-48 seq446 136 4e-30 seq4 91.5 2e-16 >seq445 Length=5314 Score = 196 bits (216), Expect = 5e-48 Identities = 145/178 (81%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||||||||||| |||||||| |||||||||||||| |||||||||||||| ||| Sbjct 4243 GGGTCTTTTCGTCCCACTGCGGGTAAACGGCATCTTCACCGTTACTACAATTTCACCGAG 4184 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 |||| || |||||||| |||||||||||||||||||||||||||||||| Sbjct 4183 CTCATGGCTGAGACAGTGTCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACCCGA 4124 Query 145 CAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTTC 202 ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 4123 CAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTC 4066 >seq446 Length=116643 Score = 136 bits (150), Expect = 4e-30 Identities = 133/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| | ||| || | | |||||||||| | | | ||||||||||| Sbjct 4461 CGGGGTCTTTCCGTCTAACCGCAGGAACCCCGCATCTTCACGGGGAATTCAATTTCACTG 4402 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || || | ||||||| ||| |||||||||||||||||||||||||| Sbjct 4401 AGTCTGCGTTGGAGACAGCGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 4342 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTTC 202 ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 4341 GACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTC 4282 >seq4 Length=33404 Score = 91.5 bits (100), Expect = 2e-16 Identities = 106/147 (72%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || || || |||||||||| || | | ||| |||| |||| Sbjct 21804 GGGTCTTTCCGTCTAGCTGCTATTATTCCGCATCTTCACGGAAAATTCAACTTCATTGAG 21745 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 | | ||||||| |||||||||| |||| |||| || |||| ||| Sbjct 21744 ATATTACTGGAGACAGTAGGGAAGTCGTTACACCATTCATGCACGTCGAAAATTACTCGA 21685 Query 145 CAAGGAATTTCGCTACCTTAGGACCGT 171 ||||||||||||||||||||||||||| Sbjct 21684 CAAGGAATTTCGCTACCTTAGGACCGT 21658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547129062018