Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq1838 441 2e-121 seq1328 306 8e-81 seq445 201 2e-49 seq446 172 1e-40 seq4 123 5e-26 seq8180 111 3e-22 seq2185 104 5e-20 >seq1838 Length=1451 Score = 441 bits (488), Expect = 2e-121 Identities = 301/336 (90%), Gaps = 2/336 (1%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| |||||| ||||||| ||| ||||||| || ||||||||||||||| ||||| Sbjct 495 CTTTACAACCCGAAGGCCTTCTT-CACCCACGCGGTAT-GGCTGGATCAGGCTTGCGCCC 552 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 553 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 612 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||||||||||||||||||||| |||||||||||||||||||| ||| ||||| | Sbjct 613 TGTGGCTGATCATCCTCTCAGACCAGCTACGGATCGTCGCCTTGGTGGGCCTTTACCCCG 672 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct 673 CCAACTAGCTAATCCGACATCGGCTCATCTATCCGCGCAAGGCCCGAAGGTCCCCTGCTT 732 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAG 300 || |||| ||| |||||||||||||||||| |||||| |||||||||||||| | || Sbjct 733 TCACCCGAAGGTCGTATGCGGTATTAGCGTAAGTTTCCCTACGTTATCCCCCACGAAAAG 792 Query 301 GCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTC 336 | ||||||| | | ||| |||||||||||||| ||| Sbjct 793 GTAGATTCCGATGTATTCCTCACCCGTCCGCCACTC 828 >seq1328 Length=80990 Score = 306 bits (338), Expect = 8e-81 Identities = 270/336 (80%), Gaps = 16/336 (5%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| || | | ||||| | ||| |||||||||| ||||||||||||||| ||||| Sbjct 3771 CTTTACAACCCTAGGGCCTTCAT-CACTCACGCGGCAT-GGCTGGATCAGGCTTGCGCCC 3828 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 3829 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 3888 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||||||||||||||||||||| || |||||||||||||||| ||| ||||| || Sbjct 3889 TGTGGCTGATCATCCTCTCAGACCAGCTATGGATCGTCGCCTTGGTAGGCCTTTACCCCA 3948 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 ||||||||||||||| || |||||||| || || | | ||| Sbjct 3949 CCAACTAGCTAATCCAACGCGGGCTCATC--------CATCTCCGATAAAT------CTT 3994 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAG 300 ||||||| ||||||||| |||||||||| ||||||| |||||| || | | Sbjct 3995 TCTCCCGAAGGACGTATACGGTATTAGCACACGTTTCCATGCGTTATTCCGTAGAGATGG 4054 Query 301 GCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTC 336 | ||||||| | || ||||||||||||| ||||||| Sbjct 4055 GTAGATTCCCACGCGTTACTCACCCGTCTGCCGCTC 4090 >seq445 Length=5314 Score = 201 bits (222), Expect = 2e-49 Identities = 173/210 (82%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 2 TTTACAATCCGAAG-ACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||||| || ||| || | | |||||||||| |||||| |||||||| ||||| Sbjct 565 TTTACAATCCATAGGACCGTCATCCTG-CACGCGGCAT-GGCTGGTTCAGGCTTGCGCCC 508 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||| |||||||||| |||||||||||||||||||||||||| |||||||||||| |||| Sbjct 507 ATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCTCAGTACCAG 448 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| |||| |||||||| | ||| ||||| |||||||| |||| |||||| | Sbjct 447 TGTGGGGGATCTCCCTCTCAGGACCCCTACCCATCGTAGCCTTGGTAAGCCGTTACCTTA 388 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCT 210 ||||||||||||| ||| | |||||||| Sbjct 387 CCAACTAGCTAATGGGACGCATGCTCATCT 358 >seq446 Length=116643 Score = 172 bits (190), Expect = 1e-40 Identities = 138/165 (84%), Gaps = 1/165 (1%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||| |||||| |||| || | |||||| |||||||||| ||||||||||| Sbjct 718 CACGCGGCAT-GGCTGGTTCAGAGTTCCCTCCATTGACCAATATTCCTTACTGCTGCCTC 660 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| | ||||||||||||| | | Sbjct 659 CCGTAGGAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGGTCATCCTCTCAGATCCCCT 600 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAAT 193 | ||||||||||||||| ||| ||||| | ||||||||||||| Sbjct 599 AGTCATCGTCGCCTTGGTGGGCCGTTACCCCGCCAACTAGCTAAT 555 >seq4 Length=33404 Score = 123 bits (136), Expect = 5e-26 Identities = 145/190 (76%), Gaps = 7/190 (4%) Strand=Plus/Minus Query 18 CTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCC 77 |||||| | | |||| | |||| |||||||| |||||||| |||||||||||||||||| Sbjct 14344 CTTCTTCCCC-CACGTGATATTG-CTGGATCAAGCTTTCGCTCATTGTCCAATATTCCCC 14287 Query 78 ACTGCTGCCTCCCGTA-GGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCT 136 ||||||||||| || ||| ||| | | | ||| ||||| |||| ||||||||||| Sbjct 14286 ACTGCTGCCTC---TATCGAGGTTGGTCTTTCTTTCAATTCCAATGTGGCTGATCATCCT 14230 Query 137 CTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGC-TAATCC 195 | ||||||| |||| ||| | | |||| | || ||||| ||||||| | |||| | Sbjct 14229 CCCAGACCAACTACGAATCTTTGGCTTGTTTGGCTTTTACCCTTCCAACTACCTTAATTC 14170 Query 196 GACCTAGGCT 205 || || ||| Sbjct 14169 GATATAAGCT 14160 >seq8180 Length=713 Score = 111 bits (122), Expect = 3e-22 Identities = 124/165 (75%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 41 GCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCT 100 ||||||||| |||| ||| |||||||||||||||| ||||| |||| | | |||| | Sbjct 661 GCTGGATCAAGCTTGCGCTCATTGTCCAATATTCCTTACTGCAGCCT--CTTCAGAGTTT 604 Query 101 GGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGC 160 || | | | ||| | ||| |||| ||||||| ||||| |||| |||| ||| | Sbjct 603 GGTCGTTCTTTCAATACCAATGTGGATGATCATTCTCTCGAACCACCTACGAATCTCAGG 544 Query 161 CTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGACCTAGGCT 205 ||||| |||| ||||| |||||||| ||||| |||| || ||| Sbjct 543 TTTGGTAAGCCTTTACCCCACCAACTGCCTAATTCGACATACGCT 499 >seq2185 Length=1414 Score = 104 bits (114), Expect = 5e-20 Identities = 79/91 (87%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 ||||||| |||||| || || | | | |||||||| ||| ||| ||||||||| |||||| Sbjct 1326 TTTACAACCCGAAGGCCGTCGTCC-CTCACGCGGCGTTG-CTGCATCAGGCTTGCGCCCA 1383 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGT 92 |||| |||||||||||||||||||||||||| Sbjct 1384 TTGTGCAATATTCCCCACTGCTGCCTCCCGT 1414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071856544960