Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= AAMG01001182.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq5966 150 3e-34 seq10135 118 2e-24 seq873 113 7e-23 >seq5966 Length=1918 Score = 150 bits (166), Expect = 3e-34 Identities = 159/208 (76%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 33 TCTTCGCGCGCTTTTT-TCGTCCAGGCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGT 91 ||| | ||||| ||| ||| | |||||||||||| |||||||||| |||||||||| Sbjct 982 TCTGCTCGCGCATTTCGTCGCTGATGCCCGGTGCCGGTGCTTCTTCCACCACCTTCTGGT 1041 Query 92 GACGACGTTGCAGCGAGCAATCGCGGTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGG 151 | || || |||| |||||| ||||| || || ||||||||||||| |||||||||||||| Sbjct 1042 GGCGGCGCTGCATCGAGCAGTCGCGCTCACCGAGGTGGATGGCGTTGCCCTGGCCGTCGG 1101 Query 152 ACAGTACTTGCACTTCCACGTGACGTGGGTTGGTCAGGTACTTTTCCAGGTAGACCATCG 211 ||| || || | |||||||| || || || |||| |||| |||| ||| ||| Sbjct 1102 CCAGCACCTGGATCTCCACGTGGCGCGGATTCTCCAGGAACTTCTCCATGTACACCTGGT 1161 Query 212 GGTTGCCGAACCAGGCGCCCGCTTCGGA 239 ||||| ||| ||| ||||||||| Sbjct 1162 CGTTGCTGAAGGCGGCCTTCGCTTCGGA 1189 >seq10135 Length=285 Score = 118 bits (130), Expect = 2e-24 Identities = 125/165 (76%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 57 GCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCG 116 ||| || || |||||||||||||| || || || || || ||||||| |||||||||||| Sbjct 27 GCCAGGCGCTGGCGCTTCTTCCAGAACTTTTTGATGGCGGCGTTGCATCGAGCAATCGCG 86 Query 117 GTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACG 176 |||||||| |||||||| || |||| | ||| | || | |||||||||||| Sbjct 87 TTCGCCCAGCCAGATGGCGTTTTTGTGTTCGTCAGCCAGGATCTGGATTTCCACGTGACG 146 Query 177 TGGGTTGGTCAGGTACTTTTCCAGGTAGACCATCGGGTTGCCGAA 221 ||| || ||||||||| |||| ||||| ||| || ||||| Sbjct 147 TGGATTTTCCAGGTACTTCTCCATATAGACTTCCGGATTACCGAA 191 >seq873 Length=95130 Score = 113 bits (124), Expect = 7e-23 Identities = 131/175 (75%), Gaps = 4/175 (2%) Strand=Plus/Plus Query 70 GCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGTCGCCCAGGTGG 129 ||||||||| ||||||||||| || || |||| |||||| ||||| |||||||| || Sbjct 44944 GCTTCTTCCCAGACCTTCTGGTGGCGGCGCTGCAACGAGCAGTCGCGTTCGCCCAGATGC 45003 Query 130 ATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACGTGGGTTGGTCAGG 189 | ||| | |||| ||||||| || || || ||||| | ||||| || || |||| Sbjct 45004 ACGGCCTTGCCCATGCCGTCGCCCATCACCTGAACTTCGATATGACGCGGCTTCTGCAGG 45063 Query 190 TACTTTTCCAGGTAGAC--CATCGGGTTGCCGAACCAGGCGCCCGCTTCGGAGCG 242 |||||||| | |||||| | || || ||| || ||||| ||||||||||| Sbjct 45064 TACTTTTCGATGTAGACGGCGTC--GTCGCCAAAGGCTGCGCCGGCTTCGGAGCG 45116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735904586340