Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq1328 356 8e-96 seq445 336 8e-90 seq3111 329 1e-87 seq446 325 1e-86 seq2288 269 1e-69 seq2213 192 2e-46 seq9120 134 5e-29 >seq1328 Length=80990 Score = 356 bits (394), Expect = 8e-96 Identities = 418/555 (75%), Gaps = 20/555 (4%) Strand=Plus/Plus Query 52 CGGCATTCGGAGTTTGGTTGATTTCGGTAAGCTTGTGGGC-CCCCTAGACCATCCAGTGC 110 ||| ||||||||||||||| || ||||| ||| | ||||||| ||||||||||| Sbjct 775 CGGTATTCGGAGTTTGGTTAGGTTTGGTAAATCGGTGAGATCCCCTAGCCCATCCAGTGC 834 Query 111 TCTACCTCCGGGAAGAAACACG--CGACGCTGCACCTAAATGCATTTCGGGGAGAACCAG 168 |||||| ||| ||| | || ||||||| |||||||| |||||| |||||||||| Sbjct 835 TCTACCCCCG--AAGGTATTCGATCGACGCTCTACCTAAATAGATTTCGCGGAGAACCAG 892 Query 169 CTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAA 228 ||||| | ||||||||||||||||||||||||| ||||| |||||||| || ||| Sbjct 893 CTATCTCCAAGTTTGATTGGCCTTTCACCCCTAGCCACAAGTCATCCCAATCTATTGCAA 952 Query 229 CCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGA 288 | | | ||||||||||||||| || ||||| ||||||||||| ||||| |||| Sbjct 953 CAGATGCGGGTTCGGTCCTCCAGTAAGTGTTACCTTACCTTCAACCTGCTCATGGCTAGA 1012 Query 289 TCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCT 348 |||||| | ||||||||| || ||| | ||||||| ||| |||||||||||||| Sbjct 1013 TCACTTGGTTTCGGGTCTAATCCGACGAACTGA-ACGCCCTGTTCAGACTCGCTTTCGCT 1071 Query 349 ACGGCTACCCCACACGGGTTAACCT--CGCGACACAACGCAAACTCGCAGGCTCATTCTT 406 || |||| || ||| |||| || | || || | | || |||| | | |||| | Sbjct 1072 GCGCCTACACCTACCGGTTTAAGCTTGCTCGTCAGA---CTAAGTCGCTGACCCATTATA 1128 Query 407 CAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCA 466 ||||||| |||| |||||| | || ||| ||| ||||| || | ||||||||| Sbjct 1129 CAAAAGGTACGCTGTCACCCAGAAC--AAA----TCTTGGGCTCCAACTGTTTGTAGGCA 1182 Query 467 CATGGTTTCAGGTACTATTTCACTCCCC--GCCAGGGGTACTTTTCACCTTTCCCTCACG 524 ||||||||| || ||||||||||| | | ||||| |||||||||||||||||||| Sbjct 1183 TTCGGTTTCAGGATCTCTTTCACTCCCCTTGTC-GGGGTGCTTTTCACCTTTCCCTCACG 1241 Query 525 GTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGAT 584 ||||| || |||||||||||| | ||||| |||||||| | |||||| | ||| | Sbjct 1242 GTACTGGTTCGCTATCGGTCATGCACGAGTACTTAGGCTTGGAGAGTGGTCTCCCCATGT 1301 Query 585 TCACACGAAATTTCA 599 ||| || |||||| Sbjct 1302 TCAGACAGGATTTCA 1316 >seq445 Length=5314 Score = 336 bits (372), Expect = 8e-90 Identities = 355/464 (77%), Gaps = 24/464 (5%) Strand=Plus/Minus Query 135 ACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTC 194 |||||||||||||||||||||||||||| || |||||| | ||||||||||||||||| Sbjct 3038 ACGCTGCACCTAAATGCATTTCGGGGAGTACGAGCTATTTCCGAGTTTGATTGGCCTTTC 2979 Query 195 ACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCG 254 ||||||| ||||||||||||| | |||||||| | | ||||||||||||||| Sbjct 2978 ACCCCTACCCACAGGTCATCCGAAGACTTTTCAACGTCAACCGGTTCGGTCCTCCACTGT 2919 Query 255 GTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTG 314 || ||||| |||||||||||||||||| |||||||| | |||| |||| | Sbjct 2918 GTGTTACCACAGCTTCAACCTGCCCATGGGTAGATCACACGGTTTCGCGTCTAACACTAC 2859 Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGG------TT 368 ||| | |||||||||| |||||||||||||| ||| | ||| || | || Sbjct 2858 TGACTAAAGCGCCCTATTCAGACTCGCTTTCGCTGCGGAT---CCATACCTGAAGTACTT 2802 Query 369 AACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGG 428 | ||| || | || || |||||| ||||||||| | ||||||||||||||||||| Sbjct 2801 ATCCTTGCCA-GCAGCGTTAACTCGTAGGCTCATTATGCAAAAGGCACGCCGTCACC--- 2746 Query 429 TACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCA 488 | |||||| |||||||| | ||||| || ||||||||||| |||||||| Sbjct 2745 -CCACAAAAGG-------GCTCCGACCGCTTGTAAGCGTATGGTTTCAGGATCTATTTCA 2694 Query 489 CTCC--CCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCAC 546 |||| || ||| ||||||||||||||||||||||||| || | ||||||||| | Sbjct 2693 CTCCGTTATTCA-CGGTTCTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTCTC 2635 Query 547 CAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACAC 590 |||||||||||| |||| ||| ||||||||||| ||||| || Sbjct 2634 TCAGGAGTATTTAGCCTTAGCGGATGGTCCCGCCAAATTCAGAC 2591 >seq3111 Length=1418 Score = 329 bits (364), Expect = 1e-87 Identities = 393/523 (75%), Gaps = 18/523 (3%) Strand=Plus/Minus Query 45 CACTTCCCGGCATTCGGAGTTTGGTTGATTTCGGTAAG-CTTGTGGGCCCCCTAGACCAT 103 ||||| || |||||||||||| | || |||||| | | | |||||||| | | Sbjct 517 CACTTGTAGGTATTCGGAGTTTGCATCGGTTTGGTAAGTCGGGATGACCCCCTAGCCGAA 458 Query 104 CCAGTGCTCTACCTCCGGGAA-GAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAG 162 |||||||||||| || | || ||| | | |||| |||||||| ||||| |||| Sbjct 457 ACAGTGCTCTACCCCCTACAGTGATACATGAGGCGCT--ACCTAAATAGCTTTCGAGGAG 400 Query 163 AACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGT 222 ||||||||||| | || |||||| ||||||||| || ||||||||||||||| || | | Sbjct 399 AACCAGCTATCTCCGAGCTTGATTAGCCTTTCACTCCGATCCACAGGTCATCCGCTAACT 340 Query 223 TTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATG 282 ||||||| ||| |||||||||||||| || |||||| |||||||||||||||| Sbjct 339 TTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTGTTACCCAACCTTCAACCTGCCCATG 280 Query 283 GATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCT 342 |||||||| | | ||||||||| | || ||| | |||||||||| |||||||| Sbjct 279 GATAGATCGCCCGGTTTCGGGTCTATTCCCAGCGACT-AGACGCCCTATTAAGACTCGCT 221 Query 343 TTCGCTACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCAT 402 ||||||||| || ||| | | |||||| ||||| || || || |||| | | ||| Sbjct 220 TTCGCTACGCCTCCCCTATTC-GGTTAAGCTCGCCACTGAA-AATAAGTCGCTGACCCAT 163 Query 403 TCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTA 462 | | ||||||| |||| ||||| | || |||| || ||||| || | ||||| Sbjct 162 TATACAAAAGGTACGCAGTCAC--AGAAC---AAAG-----TCTGCTCCCACTGCTTGTA 113 Query 463 GGCACATGGTTTCAGGTACTATTTCACTCCCCGC-CAGGGGTACTTTTCACCTTTCCCTC 521 ||| | ||||||||| |||||||||||||| | | ||||| |||||| |||||||||| Sbjct 112 CGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTC 53 Query 522 ACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTT 564 |||||||| || | |||||||||| || ||||||||| ||| Sbjct 52 ACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTT 10 >seq446 Length=116643 Score = 325 bits (360), Expect = 1e-86 Identities = 406/547 (74%), Gaps = 26/547 (5%) Strand=Plus/Minus Query 54 GCATTCGGAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGT-GCTC 112 |||||||||||||| || || |||| | || ||||| ||| |||| |||| Sbjct 3338 GCATTCGGAGTTTGTCTGGATTTGGTAGGATTTGACTCCCCCGCACCCAATCAGTAGCTC 3279 Query 113 TACCTCCGGGAAGAA----ACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAG 168 |||||| || || || | | |||||| |||||| |||||||||||| || || Sbjct 3278 TACCTCTA--AATAACTTTAC-CTCAACGCTGTTCCTAAAAACATTTCGGGGAGTACGAG 3222 Query 169 CTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAA 228 |||| | ||||||||| |||||||||||||| |||||| |||||| | ||||||| Sbjct 3221 CTATTTCCCAGTTTGATTAGCCTTTCACCCCTACCCACAGATCATCCGGAAACTTTTCAA 3162 Query 229 CCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGA 288 | | | |||||||||||||| || ||||| |||||||||| |||||| |||| Sbjct 3161 CGTTTATCGGTTCGGTCCTCCAGTACGTGTTACCGCACCTTCAACCTGTCCATGGGTAGA 3102 Query 289 TCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCT 348 |||| | |||| |||| || ||| ||||||||||||| |||||||||||||| Sbjct 3101 TCACAAGGTTTCGCGTCTACCTCCCCTGACT-ATACGCCCTATTCAGACTCGCTTTCGCT 3043 Query 349 ACGGCTAC----CCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTC 404 ||| | | | | || ||||||| || | | || |||||| ||||||||| Sbjct 3042 TCGGATCCGTGTCTTAAAC-ACTTAACCTTGCCAGAGAAGAGTAACTCGTAGGCTCATTA 2984 Query 405 TTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGG 464 | |||||||||||||||||| | |||| | || |||||||| | ||||| | Sbjct 2983 TGCAAAAGGCACGCCGTCAC--GCCACCT-----GGAC----GCTCCGACCGCTTGTAAG 2935 Query 465 CACATGGTTTCAGGTACTATTTCACTCCCC-GCCAGGGGTACTTTTCACCTTTCCCTCAC 523 |||| ||||||||| |||||||||||||| | ||||| ||||||||||||||||||| Sbjct 2934 CACACAGTTTCAGGTTCTATTTCACTCCCCTGTTCGGGGTTCTTTTCACCTTTCCCTCAC 2875 Query 524 GGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGA 583 |||||| || | ||||||||| | |||||||||||| |||| ||| |||| ||| |||| Sbjct 2874 GGTACTGGTTCACTATCGGTCTCTCAGGAGTATTTAGCCTTACCGGATGGTGCCGGCAGA 2815 Query 584 TTCACAC 590 ||| ||| Sbjct 2814 TTCCCAC 2808 >seq2288 Length=2140 Score = 269 bits (298), Expect = 1e-69 Identities = 395/547 (72%), Gaps = 25/547 (5%) Strand=Plus/Minus Query 49 TCCCGGCATTCGGAGTTTGGT-TGATTTCGGTAAG-CTTGTGGGCCCCCTAGACCATC-C 105 || ||| |||||||||||| || ||| |||||| | | | |||||||| |||| | Sbjct 1225 TCTCGGTATTCGGAGTTTGCAATGGTTT-GGTAAGTCGCGATGACCCCCTAG-CCATAAC 1168 Query 106 AGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAAC 165 ||||||||||| ||| || || ||| || || |||||||| ||||| ||||||| Sbjct 1167 AGTGCTCTACCCCCGAGAGGATACATATGAGGCGCTACCTAAATAGCTTTCGAGGAGAAC 1108 Query 166 CAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTT 225 |||||||| | ||| |||| || |||||| |||| ||||| |||||||| ||| Sbjct 1107 CAGCTATCTCCGGGTTCGATTAGCTTTTCACTCCTAATCACAGCTCATCCCCGTCTTTTG 1048 Query 226 CAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGAT 285 |||| | |||||||||| |||||| | |||| ||||| |||| ||||| | Sbjct 1047 CAACAGACGTGGGTTCGGGCCTCCAGTACCTGTTACGGCACCTTCACCCTGGCCATGACT 988 Query 286 AGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTC 345 ||||||| | ||||||||| | || ||| || |||||| || |||||| |||| Sbjct 987 AGATCACCCGGTTTCGGGTCTACTGCCCGCGACT-ATGCGCCCTTATCAGACTCGGTTTC 929 Query 346 GCTACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCT 405 || || || ||| | || |||||| || || || ||| || |||| | | |||| | Sbjct 928 CCTTCGCCTCCCCTATAC-GGTTAAGCTTGCCAC-GAACAGTAAGTCGCTGACCCATTAT 871 Query 406 TCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTC-AGCTCCGACGGATTGTAGG 464 ||||||| |||| ||||| || ||| |||||| || | ||||| | Sbjct 870 ACAAAAGGTACGCAGTCAC------TCT---------TTCGAGCTCCTACTGCTTGTACG 826 Query 465 CACATGGTTTCAGGTACTATTTCACTCCCCGC-CAGGGGTACTTTTCACCTTTCCCTCAC 523 |||| ||||||||| |||||||||||||| | | ||||| |||||| |||||||||||| Sbjct 825 CACACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCAC 766 Query 524 GGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGA 583 |||||| || | ||||||||| || ||||||||| ||| || ||||||| ||| Sbjct 765 GGTACTGGTTCACTATCGGTCGGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATG 706 Query 584 TTCACAC 590 |||| || Sbjct 705 TTCAGAC 699 >seq2213 Length=1110 Score = 192 bits (212), Expect = 2e-46 Identities = 173/214 (81%), Gaps = 14/214 (7%) Strand=Plus/Minus Query 388 AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAG 447 |||||| ||||||||| | ||||||||||||||||||| || |||||| | Sbjct 1109 AACTCGTAGGCTCATTATGCAAAAGGCACGCCGTCACCCC--AC--AAAAGG-------G 1061 Query 448 CTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGC--CAGGGGTAC 505 ||||||| | ||||| || ||||||||||| |||||||||||| || || | | Sbjct 1060 CTCCGACCGCTTGTAAGCGTATGGTTTCAGGATCTATTTCACTCCGTTATTCACGGTT-C 1002 Query 506 TTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTA 565 |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct 1001 TTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCATCTGGGAGTATTTAGGCTTA 942 Query 566 ACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 | |||||||| | |||||||||||| |||||| Sbjct 941 TCAGGTGGTCCTGACAGATTCACACGGGATTTCA 908 >seq9120 Length=266 Score = 134 bits (148), Expect = 5e-29 Identities = 85/92 (92%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 508 TTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAAC 567 |||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||| | Sbjct 1 TTCACCTTTCCCTCACGGTACTAGTCCGCTATCGGTCACCAGGGAGTATTCAGGCTTATC 60 Query 568 GGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 ||||||||||| ||||||||||| | |||||| Sbjct 61 GGGTGGTCCCGACAGATTCACACCAGATTTCA 92 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817356768768