Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq3111 574 1e-161 seq2288 419 6e-115 seq1328 325 1e-86 seq445 288 2e-75 seq446 279 1e-72 seq2213 168 2e-39 seq9120 78.8 2e-12 >seq3111 Length=1418 Score = 574 bits (636), Expect = 1e-161 Identities = 359/374 (96%), Gaps = 9/374 (2%) Strand=Plus/Minus Query 3 TCCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTA 62 ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct 365 TCCGATCCACAGGTCAT-CCGCTAACTTTT-CAACGGTAGTCGGTTCGGTCCTCCAGTTA 308 Query 63 GTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTT 122 || ||||||||||||| |||||||||||| |||||||||||||||||| |||||||||| Sbjct 307 GT-GTTACCCAACCTT-CAACCTGCCCAT-GGATAGATCGCCCGGTTT-CGGGTCTATT- 253 Query 123 CCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAA 182 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct 252 CCCAGCGACTAGACGCCCTATTAAGACTCGCTTT-CGCTACGCCTCCCCTATTCGGTTAA 194 Query 183 GCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACA 242 ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 193 GCTC-GCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACAGAACA 135 Query 243 AAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCG 302 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 134 AAGTCTGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCG 75 Query 303 GGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTA 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 74 GGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTA 15 Query 363 GCCTTGGAGGATGG 376 |||||||||||||| Sbjct 14 GCCTTGGAGGATGG 1 >seq2288 Length=2140 Score = 419 bits (464), Expect = 6e-115 Identities = 346/411 (84%), Gaps = 13/411 (3%) Strand=Plus/Minus Query 10 CACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTA 69 ||||| |||| || | ||||| |||| | || ||||||| |||||||| | |||| Sbjct 1069 CACAGCTCATCCCCGT--CTTTTGCAACAGACGTGGGTTCGGGCCTCCAGTACCT-GTTA 1013 Query 70 CCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCG 129 | ||||| || |||| |||| | |||||| |||||||| |||||||| | ||| ||| Sbjct 1012 CGGCACCTT-CACCCTGGCCAT-GACTAGATCACCCGGTTT-CGGGTCTACTGCCC-GCG 957 Query 130 ACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTTTGC 189 |||| |||||| | ||||||| ||| | || |||||||||||| ||||||||||| || Sbjct 956 ACTATGCGCCCTTATCAGACTCGGTTTCC-CTTCGCCTCCCCTATACGGTTAAGCTT-GC 899 Query 190 CACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGG 249 ||| | | |||||||||||||||||||||||||||||||||||||| | || Sbjct 898 CACGAACAGTAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACTCTTTCGAG---- 843 Query 250 CTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT 309 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 842 CTCCTACTGCTTGTACGCACACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT 783 Query 310 TTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGG 369 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 782 TTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCGGTCAGTAGTATTTAGCCTTGG 723 Query 370 AGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 |||||||||||||||| |||||||| ||||| ||||| ||| |||||||| Sbjct 722 AGGATGGTCCCCCCATGTTCAGACAGGGTTTCACGTGCCCCGCCCTACTCG 672 >seq1328 Length=80990 Score = 325 bits (360), Expect = 1e-86 Identities = 330/416 (79%), Gaps = 14/416 (3%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| ||||| || | || || |||| | | |||||||||||||||| ||| ||| Sbjct 927 CCACAAGTCATCCCAAT--CTATTGCAACAGATGCGGGTTCGGTCCTCCAGTAAGT-GTT 983 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| ||||| |||||||| ||| || |||||| | ||||| |||||||| | || | Sbjct 984 ACCTTACCTT-CAACCTGCTCAT-GGCTAGATCACTTGGTTT-CGGGTCTAAT-CCGACG 1039 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC-CCTATTCGGTTAAGCTTT 187 ||| ||||||| | ||||||||||| |||| ||||| | |||| | |||||||| Sbjct 1040 AACTGAACGCCCTGTTCAGACTCGCTTT-CGCTGCGCCTACACCTACCGGTTTAAGCTT- 1097 Query 188 GCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCA--ACAAAG 245 || | | | |||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 1098 GCTCGTCAGACTAAGTCGCTGACCCATTATACAAAAGGTACGCTGTCACCCAGAACAAAT 1157 Query 246 --TGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGG 303 |||||||| |||| ||||| |||| |||||||||||||| |||||||||||| ||| Sbjct 1158 CTTGGGCTCCAACTGTTTGTAGGCATTCGGTTTCAGGATCTCTTTCACTCCCCTTGTCGG 1217 Query 304 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAG 363 ||| |||||| |||||||||||||||||| |||| |||||||||| || |||| |||| Sbjct 1218 GGTGCTTTTCACCTTTCCCTCACGGTACTGGTTCGCTATCGGTCATGCACGAGTACTTAG 1277 Query 364 CCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 ||||||| ||||| |||||| |||||||| |||| |||| ||| ||||||| Sbjct 1278 GCTTGGAGAGTGGTCTCCCCATGTTCAGACAGGATTTCACGTGTCCCGCCCTACTC 1333 >seq445 Length=5314 Score = 288 bits (318), Expect = 2e-75 Identities = 321/415 (77%), Gaps = 13/415 (3%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||||||||| ||| |||||| ||||| | ||||||||||||||| | || ||| Sbjct 2970 CCACAGGTCAT-CCGAAGACTTTT-CAACGTCAACCGGTTCGGTCCTCCACTGTGT-GTT 2914 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| | ||| |||||||||||| || |||||| | |||||| || ||||| | | Sbjct 2913 ACCACAGCTT-CAACCTGCCCATGGG-TAGATCACACGGTTT-CGCGTCTAACACT-ACT 2858 Query 129 GACTAGA-CGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC---CCTATTCGGTTAAGC 184 ||||| | ||||||| | ||||||||||| |||| || ||| ||| | | | Sbjct 2857 GACTAAAGCGCCCTATTCAGACTCGCTTT-CGCTGCGGATCCATACCTGAAGTACTTATC 2799 Query 185 TTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAA 244 |||||| ||| ||| | | |||||| ||||||| |||| ||||||| ||||| Sbjct 2798 CTTGCCAGCAGCGTTAACTCGTAGGCTCATTATGCAAAAGGCACGCCGTCACCCCACAAA 2739 Query 245 GTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGG 304 ||||||| || ||||||| || || ||||||||||||||||||||||| | | | | Sbjct 2738 A-GGGCTCCGACCGCTTGTAAGCGTATGGTTTCAGGATCTATTTCACTCCGTTATTCACG 2680 Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364 ||||||||| |||||||||||||||||| |||||||||||||| |||| |||||||||| Sbjct 2679 GTTCTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTCTCTCAGGAGTATTTAGC 2620 Query 365 CTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 ||| | |||||||||| ||| ||||||||| ||||| ||||| ||| ||||||| Sbjct 2619 CTTAGCGGATGGTCCCGCCAAATTCAGACAGGGTTTCACGTGCCCCGCCCTACTC 2565 >seq446 Length=116643 Score = 279 bits (308), Expect = 1e-72 Identities = 312/402 (78%), Gaps = 19/402 (5%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 |||||| |||| ||| ||||||| ||||| | |||||||||||||||||| || ||| Sbjct 3187 CCACAGATCAT-CCGGAAACTTTT-CAACGTTTATCGGTTCGGTCCTCCAGTACGT-GTT 3131 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| ||||| ||||||| |||| || |||||| | ||||| || ||||| |||| Sbjct 3130 ACCGCACCTT-CAACCTGTCCATGGG-TAGATCACAAGGTTT-CGCGTCTACCTCCCCT- 3075 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC----CCTATTCGGTTAAGC 184 ||||| |||||||| | ||||||||||| |||| || ||| | || | |||| | Sbjct 3074 GACTATACGCCCTATTCAGACTCGCTTT-CGCTTCGGATCCGTGTCTTAAACACTTAACC 3016 Query 185 TTTGCCACTGAAAA-TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAA 243 || |||| ||| | ||| ||| | | |||||| ||||||| |||| ||||| | || Sbjct 3015 TT-GCCAGAGAAGAGTAACTCGTAGGCTCATTATGCAAAAGGCACGCCGTCACGCCACC- 2958 Query 244 AGTGG--GCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCC 301 ||| ||||| || ||||||| ||| || |||||||| |||||||||||||||| | | Sbjct 2957 --TGGACGCTCCGACCGCTTGTAAGCACACAGTTTCAGGTTCTATTTCACTCCCCTGTTC 2900 Query 302 GGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTT 361 |||||||||||| |||||||||||||||||| |||||||||||||| |||| ||||||| Sbjct 2899 GGGGTTCTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTCTCTCAGGAGTATTT 2840 Query 362 AGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTC 403 |||||| ||||||| || || |||| |||| | |||| Sbjct 2839 AGCCTTACCGGATGGTGCCGGCAGATTCCCACAAGGCGTCTC 2798 >seq2213 Length=1110 Score = 168 bits (186), Expect = 2e-39 Identities = 170/220 (77%), Gaps = 1/220 (0%) Strand=Plus/Minus Query 199 TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTG 258 ||| ||| | | |||||| ||||||| |||| ||||||| ||||| ||||||| || | Sbjct 1110 TAACTCGTAGGCTCATTATGCAAAAGGCACGCCGTCACCCCACAAAA-GGGCTCCGACCG 1052 Query 259 CTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTT 318 |||||| || || ||||||||||||||||||||||| | | | |||||||||| |||| Sbjct 1051 CTTGTAAGCGTATGGTTTCAGGATCTATTTCACTCCGTTATTCACGGTTCTTTTCACCTT 992 Query 319 TCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTC 378 |||||||||||||| || | |||||||||| | ||||||||| ||| | ||||| Sbjct 991 TCCCTCACGGTACTTGTCCGCTATCGGTCATCTGGGAGTATTTAGGCTTATCAGGTGGTC 932 Query 379 CCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 | || ||||| || |||| || || |||| ||||| Sbjct 931 CTGACAGATTCACACGGGATTTCACGGGCCCCGTGCTACT 892 >seq9120 Length=266 Score = 78.8 bits (86), Expect = 2e-12 Identities = 82/108 (76%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 311 TTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 ||| ||||||||||||||||||||| | |||||||||| | |||||| || ||| Sbjct 1 TTCACCTTTCCCTCACGGTACTAGTCCGCTATCGGTCACCAGGGAGTATTCAGGCTTATC 60 Query 371 GGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 || ||||||| || ||||| || | |||| || || | || ||||| Sbjct 61 GGGTGGTCCCGACAGATTCACACCAGATTTCACGGGCCCGGTGCTACT 108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241433849088