Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq1328 217 3e-54 seq1838 197 3e-48 seq446 181 2e-43 seq445 165 2e-38 seq4 91.5 3e-16 seq2185 82.4 2e-13 >seq1328 Length=80990 Score = 217 bits (240), Expect = 3e-54 Identities = 231/304 (76%), Gaps = 17/304 (6%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||||| || | |||||||| |||||| ||||||||||||||||||||| Sbjct 3803 GGCATGGCTGGATCAGGCTTGCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 3862 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||||| || |||| ||| Sbjct 3863 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTATGGAT 3922 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||||| |||||| ||| ||| | ||||||||| |||||| |||| || |||| || Sbjct 3923 CGTCGCCTTGGTAGGCCTTTACCCCACCAACTAGCTAATCCAACGCGGGCTCATCCATCT 3982 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTC 240 |||||||||||| || ||| || | ||| |||||||||| | Sbjct 3983 CCGATAAATCTTT-CTC-CCGAAGGACG--------------TATACGGTATTAGCACAC 4026 Query 241 GTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGC 300 ||||||| ||||||||| || || || || | |||| |||||||||||||| || Sbjct 4027 GTTTCCATGCGTTATTCCGTAGAGATGGGTAGATT-CCCACGCGTTACTCACCCGTCTGC 4085 Query 301 CACT 304 | || Sbjct 4086 CGCT 4089 >seq1838 Length=1451 Score = 197 bits (218), Expect = 3e-48 Identities = 225/299 (75%), Gaps = 5/299 (2%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| |||||| || | |||||||| |||||| ||||||||||||||||||||||||||| Sbjct 533 GCTGGATCAGGCTTGCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCT 592 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 || |||||||||||| ||| |||||| | ||| |||||||| || ||||| |||||||| Sbjct 593 GGACCGTGTCTCAGTTCCAGTGTGGCTGATCATCCTCTCAGACCAGCTACGGATCGTCGC 652 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCG-AT 185 |||||||||| ||| | | ||||||| |||||| | | || ||||| || ||| | Sbjct 653 CTTGGTGGGCCTTTACCCCGCCAACTAGCTAATCCGACATCGGCTCATCTATCCGCGCAA 712 Query 186 AAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTC 245 | |||| || | || || | |||||||||||||||| ||||| Sbjct 713 GGCCCGAAGGTC---CCCTGCTTTCACCCGAAGGTCGTATGCGGTATTAGCGTAAGTTTC 769 Query 246 CAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304 | ||||||| || | | ||||| || || | | || || ||||||||||||||||| Sbjct 770 CCTACGTTATCCCCCACGAAAAGGTAGATT-CCGATGTATTCCTCACCCGTCCGCCACT 827 >seq446 Length=116643 Score = 181 bits (200), Expect = 2e-43 Identities = 225/306 (74%), Gaps = 4/306 (1%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||| ||| || |||||| |||||| || ||||||||||||||||| Sbjct 713 GGCATGGCTGGTTCAGAGTTCCCTCCATTGACCAATATTCCTTACTGCTGCCTCCCGTAG 654 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||| |||||||||||| ||| ||||| | ||| |||||||| | ||| || Sbjct 653 GAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGGTCATCCTCTCAGATCCCCTAGTCAT 594 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||||| |||||||||| ||| | | ||||||| ||||| ||| ||||||||| Sbjct 593 CGTCGCCTTGGTGGGCCGTTACCCCGCCAACTAGCTAATGACACGCATGCCCATCTTAAT 534 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTC 240 | |||||| |||| || | || |||| ||||| || ||||||||| ||| | | Sbjct 533 CCTATAAATATTTGAACATTGGATAATGCTATCCTGTGTTTTTATGCGGTCTTA--ATCC 476 Query 241 G--TTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCC 298 | |||| | ||| || || |||| ||||||| ||| ||||| ||||||| | Sbjct 475 GAATTTCTTCGGGCTATCCCCCTGATTAAGGTAGGTTGCATACGCGTTACGCACCCGTGC 416 Query 299 GCCACT 304 |||||| Sbjct 415 GCCACT 410 >seq445 Length=5314 Score = 165 bits (182), Expect = 2e-38 Identities = 217/301 (72%), Gaps = 0/301 (0%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| ||||| || | ||||||| |||||| || |||||||||||||||||| Sbjct 533 GGCATGGCTGGTTCAGGCTTGCGCCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 474 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||| |||||||||||| ||| ||||| | || |||||||| | ||||| || Sbjct 473 GAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGATCTCCCTCTCAGGACCCCTACCCAT 414 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||| | |||||| || ||| || |||||||| ||||| || ||| || ||||||||| Sbjct 413 CGTAGCCTTGGTAAGCCGTTACCTTACCAACTAGCTAATGGGACGCATGCTCATCTTTCA 354 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTC 240 || | |||| | | | |||||| | | | |||| ||||||| Sbjct 353 CCGTTGTGACTTTAATTACATCCCGATGCCGGGTCGTAATACTATGAGGTATTAATCCAA 294 Query 241 GTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGC 300 |||| | ||| || || |||||||||| |||| ||| ||||| ||||||| ||| Sbjct 293 ATTTCTCTGGGCTATCCCTCTGTGAAAGGCAGATTGCATACGCGTTACGCACCCGTGCGC 234 Query 301 C 301 | Sbjct 233 C 233 >seq4 Length=33404 Score = 91.5 bits (100), Expect = 3e-16 Identities = 112/151 (74%), Gaps = 4/151 (3%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTA-GGAGTC 65 |||| |||| | |||| | |||||| |||||| ||||||||||||||| || ||| Sbjct 14323 GCTGGATCAAGCTTTCGCTCATTGTCCAATATTCCCCACTGCTGCCTC---TATCGAGGT 14267 Query 66 TGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCG 125 ||| | | | ||| | |||||||||| | ||| |||| ||| || |||| ||| | | Sbjct 14266 TGGTCTTTCTTTCAATTCCAATGTGGCTGATCATCCTCCCAGACCAACTACGAATCTTTG 14207 Query 126 GCTTGGTGGGCTATTATCTCACCAACTACCT 156 ||||| | |||| ||| | |||||||||| Sbjct 14206 GCTTGTTTGGCTTTTACCCTTCCAACTACCT 14176 >seq2185 Length=1414 Score = 82.4 bits (90), Expect = 2e-13 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGT 58 ||||| ||||||||||| || | ||||||||||||||| ||||||||||||||||||| Sbjct 1357 GGCGTTGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGT 1414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998266394112