Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= AAMG01001590.1 Length=402 Score E Sequences producing significant alignments: (Bits) Value seq3661 172 1e-40 >seq3661 Length=284 Score = 172 bits (190), Expect = 1e-40 Identities = 177/229 (77%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 122 GTGCTGCACTCGGACAACGGTGCACCGATGAAATCGGTGACGTTGCTGAGCAAACTGTAC 181 ||||||||||| |||||||| || |||||||| ||||||||| |||||| ||| ||||| Sbjct 52 GTGCTGCACTCTGACAACGGCGCGCCGATGAAGTCGGTGACGCTGCTGACCAAGATGTAC 111 Query 182 GAACTCGGCATCACCCCGTCACGCGGACGACCACGGGTGAGTAACGATAATCCCTACTCA 241 || || |||||||| || || || || ||||| ||||| || || || || || || || Sbjct 112 GATCTGGGCATCACGCCATCTCGTGGTCGACCGCGGGTCAGCAATGACAACCCGTATTCG 171 Query 242 GAATCGCTGTTTAGAACCCTGAAATATTGCCCGCAATGGCCTCCTGGTGGTTTT-GCAGA 300 ||||| ||||| || || |||||||| |||||||| ||||| | | ||||||| |||| Sbjct 172 GAATCACTGTTCAGGACGCTGAAATACTGCCCGCAGTGGCCACTAGATGGTTTTAGCAG- 230 Query 301 TTTGGACGCGGCACGCAGCTGGGTGCGCGATTTTATCCGCTGGTACAAC 349 |||| | || || |||||| | || ||||| |||||||||| Sbjct 231 CCTGGATGATGCGCGTGTTTGGGTGAGGGACTTTATGACCTGGTACAAC 279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1183841557120