Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq3527 259 1e-66 seq1328 203 8e-50 seq3111 192 1e-46 seq2288 176 1e-41 seq446 138 3e-30 seq445 111 4e-22 >seq3527 Length=887 Score = 259 bits (286), Expect = 1e-66 Identities = 257/339 (76%), Gaps = 29/339 (9%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 |||||||||||||||||||||||||||| ||||||| |||||||| ||| | ||||||| Sbjct 549 CGACTACGCCTGTCGGCCTCGCCTTAGGTCCCGACTTACCCAGGGAAGATTAGCTTGACC 608 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTG 120 ||||||||||||| |||| ||||| | ||| ||| ||||| ||||||||||||||| Sbjct 609 CTGGAACCCTTGGTCTTTCGGAGGACGTGTTTCTCACACGTCATTCGCTACTCATGCCTG 668 Query 121 CATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACGAC 180 |||||||||||| | |||||| | | || | || ||||| | ||||||| Sbjct 669 CATTCTCACTCGTGTAGCCTCCACGGCTGGTTTACACCGCCGCTTCGCTGGCCACACGAC 728 Query 181 GCTCCCCTACCCA-------------ACCACACAGG----------------TTGCCACA 211 |||| |||||||| ||||| ||| ||||||| Sbjct 729 GCTCTCCTACCCATCAACACGGCTGGACCACGAAGGCCTACCAATAATGTCAATGCCACA 788 Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAG 271 |||||| || ||| ||||||| |||||| ||||||||||||||||||||||||||| Sbjct 789 ACTTCGGTGGCGTGCTTGAGCCCCGTTACATTGTCGGCGCGGAATCACTTGACCAGTGAG 848 Query 272 CTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCA 310 ||||||||||||||||||||| |||||||||| |||||| Sbjct 849 CTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAAGCCA 887 >seq1328 Length=80990 Score = 203 bits (224), Expect = 8e-50 Identities = 303/422 (72%), Gaps = 26/422 (6%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| |||||||||||||||| ||| || |||| | |||| ||||| | Sbjct 307 CGACTACGCCTTTCGGCCTCGCCTTAGGGGCCGGCTAACCCTGCTCAGATTAACTTTAAG 366 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCAC-CCGTCACACGCTACTCATGCCT 119 | |||||||||||| |||||| | | || ||| || | || |||||||| | Sbjct 367 CAGGAACCCTTGGACTTTCGGCGAGGGAGTCTCTCACTCCCTTTATCGTTACTCATGTCA 426 Query 120 GCATTCTCACT-CGCATCAACTCCACCACACAGTCACCCGGCAG-CTTCACCA-CTGACA 176 ||||||||||| | || | ||||| | | |||| | | ||||| | || ||| Sbjct 427 GCATTCTCACTTCTGAT-ACCTCCAAGAGCCC-TCACGGGTCTCTCTTCAACGGCTTACA 484 Query 177 CGACGCTCCCCTACCCAACC-----ACAC--AGGTTGC--------CACAGCTTCGGCGG 221 ||||||| ||||| || || | ||||| | ||||||||||| | Sbjct 485 GAACGCTCCGCTACCACTCCCGGGAACCCGAAGGTTCCAAAGAATCCACAGCTTCGGTGT 544 Query 222 ATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTT-----GACCAGTGAGCTATT 276 || ||| ||||||| |||||| ||||||| | | ||| |||||||||||| || Sbjct 545 ATGGCTTTAGCCCCGGTACATTTTCGGCGCAAAGACCCTTATTTAGACCAGTGAGCTGTT 604 Query 277 ACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCA 336 |||| ||||| || |||||||||||| |||||||| |||||||||| | | | | || Sbjct 605 ACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACATCCTGGTTGTTTTGGGATCCTCA 664 Query 337 CATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCT 396 |||||||||||||| || || |||||||| |||||| || || || ||| |||| |||| Sbjct 665 CATCCTTTCCCACTTAGCCATAACTTAGGGACCTTAGATGGTGGTCAGGGTTGTTGCCCT 724 Query 397 CT 398 || Sbjct 725 CT 726 >seq3111 Length=1418 Score = 192 bits (212), Expect = 1e-46 Identities = 291/405 (72%), Gaps = 12/405 (3%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||| | || ||||||||||||| |||||| |||| | | || ||| | | Sbjct 964 CGACTACGCTTTTCAGCCTCGCCTTAGGGACCGACTAACCCTGCGTCGATTAACGTTGCG 905 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATT--CCCACCCGTCACACGCTACTCATGCC 118 | |||| |||||| |||||| | | || | ||||| | | || |||||||| | Sbjct 904 CAGGAAACCTTGGTCTTTCGGCGTGGGTGTTTTTCACACCCATTAT-CGTTACTCATGTC 846 Query 119 TGCATTCTCACT-CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACA 176 |||||| |||| | || | ||||| || | || | || |||||| || ||| Sbjct 845 AGCATTCGCACTTCTGAT-ACCTCCAGCAAGCT-TCTCAACTCACCTTCACAGGCTTACA 788 Query 177 CGACGCTCCCCTACCCAACCACAC--AGGTTG---CCACAGCTTCGGCGGATAACTTAAG 231 ||||||| ||||| | ||| | |||| || |||||||| | || || || Sbjct 787 GAACGCTCCTCTACCGCATCACCCGAAGGTGATACCCGTAGCTTCGGTGTATGGTTTGAG 728 Query 232 CCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAG 291 ||||| ||||| || |||| | ||| ||| ||||||||||||||| ||||| ||| Sbjct 727 CCCCGTTACATCTTCCGCGCAGGCCGACTCGACTAGTGAGCTATTACGCTTTCTTTAAAG 668 Query 292 GATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTG 351 | |||||||||| ||||||||||||| | |||||| || ||||||| ||||||||| Sbjct 667 GGTGGCTGCTTCTAAGCCAACCTCCTAGCTGTCTAAGCCTTCCCACATCGTTTCCCACTT 608 Query 352 AGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCT 396 | || |||| ||| |||||||||| | |||||| ||||||||| Sbjct 607 AACCATAACTTTGGGACCTTAGCTGACGGTCTGGGTTGTTTCCCT 563 >seq2288 Length=2140 Score = 176 bits (194), Expect = 1e-41 Identities = 289/406 (71%), Gaps = 12/406 (3%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAAC-TTGAC 59 |||||||| || ||| |||||||||||| ||||||||||| | || || ||| ||| Sbjct 1676 CGACTACGACTTTCGTCCTCGCCTTAGGGGCCGACTCACCCTGCGCCGATTAACGTTGCG 1617 Query 60 CCTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCC 118 | |||| |||||| |||||| |||| || |||||| | || |||||||| | Sbjct 1616 CAAGGAAACCTTGGGCTTTCGGCGTGCGGGTTTTTCACCCGCATTATCGTTACTCATGTC 1557 Query 119 TGCATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACAC 177 |||||| |||| | | ||||| || || || | || ||||| | || || Sbjct 1556 AGCATTCGCACTTCCGATACCTCCAGCAGACT-TCTCAATCCACCTTCAACGGCTTACGG 1498 Query 178 GACGCTCCCCTACC-CAACCACACAGGT-TGC-CAC----AGCTTCGGCGGATAACTTAA 230 ||||||| ||||| | || | | | ||| ||| |||||||| | |||| Sbjct 1497 AACGCTCCTCTACCGCGTACATATAAATATGCACACCCCAAGCTTCGGTTCACTGCTTA- 1439 Query 231 GCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAA 290 |||||| || || || ||| || ||| ||||||||||||||||||| ||||| || Sbjct 1438 GCCCCGTTAAATCTTCCCCGCAGACCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAA 1379 Query 291 GGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACT 350 || |||||||||| ||||||||||||||| ||||| || ||||||| ||| ||||| Sbjct 1378 GGGTGGCTGCTTCTAAGCCAACCTCCTGGCTGTCTGTGCCTTTCCACATGGTTTTCCACT 1319 Query 351 GAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCT 396 || | || ||| ||||||||| | |||||| ||||||||| Sbjct 1318 TAGCAGTGAATTTGGGACCTTAGCTGTGGGTCTGGGTTGTTTCCCT 1273 >seq446 Length=116643 Score = 138 bits (152), Expect = 3e-30 Identities = 151/197 (77%), Gaps = 4/197 (2%) Strand=Plus/Minus Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266 ||| |||||||| | | |||||| |||| | |||||| || ||| || ||| | Sbjct 3581 CCATAGCTTCGGTGTACTACTTAATGCCCGTTT-ATTATCCATGCACGATCGCTCGACTA 3523 Query 267 GTGAGCTATTACGCACTCTTTCAAGGA-TGGCTGCTTCCAAGCCAACCTCCTGGTTGTCT 325 ||||||| ||||||||||||| || || ||||||||||||||||||| |||| | ||||| Sbjct 3522 GTGAGCTGTTACGCACTCTTTAAATGAATGGCTGCTTCCAAGCCAACATCCTAGCTGTCT 3463 Query 326 ACGCAACTCCACATCCTT--TCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCT 383 | |||| ||| || || | | ||| ||| |||| ||| |||||||||||| ||| Sbjct 3462 ATGCAATCGCACCTCGTTAGTTCAACTTAGTAGTAACTTGGGGACCTTAGCTGATGGTCT 3403 Query 384 GGGCTGTTTCCCTCTCG 400 ||| | ||||||||||| Sbjct 3402 GGGTTCTTTCCCTCTCG 3386 >seq445 Length=5314 Score = 111 bits (122), Expect = 4e-22 Identities = 279/412 (68%), Gaps = 18/412 (4%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||| ||| |||| |||||||||| || |||| ||||| || || | | | | Sbjct 3576 CGACTGTCCCTTTCGGGTTCGCCTTAGGTCCAGACTAACCCACAGCTGATTAGCATAGCT 3517 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119 ||||| |||| | | |||| | |||| ||| | |||| | || |||| |||||| Sbjct 3516 GTGGAAACCTTAGTTTTTCGGTGTGCGGGTTTCTCGCCCGCATTATCGTTACTTATGCCT 3457 Query 120 GCATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACGA 179 |||| || | | | | |||| || || | || || |||| | ||| | | Sbjct 3456 ACATTTTCTTTTCTAACCAGTCCAGCATACCTT-ACGATACACCTTCTGCCCTGTTAGAA 3398 Query 180 CGCTCCCCTACCCAACCACACAGG-TTG-----CCACAGCTTCGGCGGATAA-CTTAAGC 232 ||||||||||| | ||| | ||| ||| |||||||| ||| |||| || Sbjct 3397 TGCTCCCCTACC-ACTTACAATTGCTTGTAAATCCATAGCTTCGGTA-ATATGCTTATGC 3340 Query 233 CCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGG 292 || || ||||| || | || ||| |||||||| ||||||||||||| || | Sbjct 3339 CCGATTA--TTATCCATGCTCGTCCGCTCGACTAGTGAGCTGTTACGCACTCTTTAAATG 3282 Query 293 A-TGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCA---ACTCCACATCCTTTCCCA 348 | ||||||||||||||||||| |||| | ||||| ||| | || | | ||||| | Sbjct 3281 AATGGCTGCTTCCAAGCCAACATCCTAGCTGTCTGGGCAGACAAACCTCGTTCTTTCA-A 3223 Query 349 CTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 || || | || ||| |||||||||||| |||||| | ||||||||||| Sbjct 3222 CTTAGCATATATTTGGGGACCTTAGCTGATGGTCTGGGTTCTTTCCCTCTCG 3171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177442413568