Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq2185 192 5e-47 seq1328 145 6e-33 seq3574 131 1e-28 seq446 102 7e-20 seq445 102 7e-20 >seq2185 Length=1414 Score = 192 bits (212), Expect = 5e-47 Identities = 139/161 (86%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||||| ||||||||||| |||| ||||||||||| ||| |||||||| Sbjct 451 TCGAGTTGCAGACTCCAATCCGGACTGAGATAGGGTTTCTGGGATTGGCTTGCCCTCGCG 510 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 |||| || ||||||||| |||||||||| ||||||| |||||| | ||||||||| Sbjct 511 GGTTTGCAGCCCTCTGTCCCTACCATTGTAGTACGTGTGTAGCCCTGGTCGTAAGGGCCA 570 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||| ||||||||||||||||||||||||||||||||||||| Sbjct 571 TGATGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 611 >seq1328 Length=80990 Score = 145 bits (160), Expect = 6e-33 Identities = 131/162 (81%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||| | ||||||| ||| ||| |||| | ||||||||| ||||||| Sbjct 2903 TCGAGTTGCAGAGTGCAATCCGAACTGAGATGG-CTTTTGGAGATTAGCTCGACCTCGCG 2961 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | | || |||| |||| ||||||||| ||||||| ||||| ||| ||||||||| Sbjct 2962 GTCTCGCTGCCCACTGTCACCACCATTGTAGCACGTGTGTAGCCCAGCCCGTAAGGGCCA 3021 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTC-CGGTTTGTCAC 161 |||||||||||||||||||||||||||||| ||| || |||| Sbjct 3022 TGAGGACTTGACGTCATCCCCACCTTCCTCTCGGCTTATCAC 3063 >seq3574 Length=683 Score = 131 bits (144), Expect = 1e-28 Identities = 120/152 (79%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 ||||||||||||| | ||||| ||| || |||| |||||| ||||| |||| || Sbjct 233 TCGAGTTGCAGACCCCGATCCGAACTGAGACCAGCTTTAAGGGATTCGCTCCACCTCACG 174 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | | || |||||||||| |||||||| | |||||||||||| |||||||| || Sbjct 173 GTCTCGCAGCCCTCTGTACTGGCCATTGTAGCATGTGTGAAGCCCTGGACATAAGGGGCA 114 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCG 152 ||| ||||||||||| |||||||||||||||| Sbjct 113 TGATGACTTGACGTCGTCCCCACCTTCCTCCG 82 >seq446 Length=116643 Score = 102 bits (112), Expect = 7e-20 Identities = 118/158 (75%), Gaps = 1/158 (1%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 ||||||||||||| | ||||| ||| || |||| || |||| ||| | | || Sbjct 1627 TCGAGTTGCAGACCTCTATCCGAACTGTGAATGGCTTTTTGAGATTCGCTTGCTGTTGCC 1568 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | | || |||||||||| |||||||| ||||||| ||||| | ||||||||| Sbjct 1567 AGCTTGCTGCCCTCTGTACCATCCATTGTAGCACGTGTGTAGCCCCGGACGTAAGGGCCA 1508 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTC-CGGTTTG 157 ||| ||||||||||| ||||| |||||||| | ||||| Sbjct 1507 TGATGACTTGACGTCGTCCCCTCCTTCCTCTCTGTTTG 1470 >seq445 Length=5314 Score = 102 bits (112), Expect = 7e-20 Identities = 119/158 (75%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||||| | ||||| ||| || |||| | | ||| ||||| || | Sbjct 1443 TCGAGTTGCAGACTCCGATCCGAACTGTGACCGGCTTTATAG-ATTCGCTCCTGGTCACC 1385 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 |||| || ||||||| |||||||| ||||||| ||||| | | |||||||| Sbjct 1384 CAGTGGCTGCTCTCTGTACCGGCCATTGTAGCACGTGTGTAGCCCAAGGCGTAAGGGCCG 1325 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTC-CGGTTTG 157 ||| || ||||||||||||||||||||||| | ||||| Sbjct 1324 TGATGATTTGACGTCATCCCCACCTTCCTCACAGTTTG 1287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415946070540