Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq12569 455 5e-126 seq7664 100 5e-19 seq817 95.1 2e-17 >seq12569 Length=472 Score = 455 bits (504), Expect = 5e-126 Identities = 278/294 (95%), Gaps = 1/294 (0%) Strand=Plus/Plus Query 1 TCGAGCAACGCCAGGAGACCACAGACGGCAACGGCGATGACCAGCAACAGCGGGAAATTT 60 ||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||| Sbjct 4 TCGAGCAACGCCAATAGACCGCAAACGGCAACGGCGATGACCAGCAACAGCGGGAAATTT 63 Query 61 AGCGACATAGGACCTAACTATCCAACCTGAGCACCGCAAGGAAGGCTTCTTAGTGGAATT 120 || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 64 AGTGACATAGGACCTAACTATCCAACCTGAGCACCGCAAGGAAGGCTTCTT-GTGGAATT 122 Query 121 TCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTG 180 |||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct 123 TCCACGTTACCCACTTGCTTCATGCGTTTTTTACCGGCCTTTTGCTTCTCGAGCAGCTTG 182 Query 181 CGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTG 240 ||||||||||| ||||| ||||| ||||||||||||||||||||||||||||| |||||| Sbjct 183 CGCTTACGGCTGACGTCGCCGCCATAGCATTTGGCCAGTACGTTCTTTCTGAGTGCCTTG 242 Query 241 ACGGAGGTCCGCGCAATGATCTGCCCGCCAATGGCGGCCTGGATCGCGACGTCG 294 ||||| ||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct 243 ACGGAAGTCCGTGCAATGATCTGCCCGCCGATGGCGGCCTGGATCGCGACGTCG 296 >seq7664 Length=1126 Score = 100 bits (110), Expect = 5e-19 Identities = 120/161 (75%), Gaps = 8/161 (5%) Strand=Plus/Plus Query 138 CTTCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTC 197 ||||||||| || || || |||| |||||||| || ||||||||||| ||| | | ||| Sbjct 489 CTTCATGCGCTTCTTGCCCTCCTTCTGCTTCTCGAGAAGCTTGCGCTTGCGGGTGATGTC 548 Query 198 ACCGCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGA-GGTC---CGCG 253 |||||||||||| ||||| || || | ||| | || || ||||| |||| || | Sbjct 549 ACCGCCGTAGCACTTGGCGAGCACATCCTTGCGGATCGC----ACGGATGGTCTCGCGGG 604 Query 254 CAATGATCTGCCCGCCAATGGCGGCCTGGATCGCGACGTCG 294 | ||||| || | || || || |||||||||| || ||| Sbjct 605 CGATGATGCGCGCACCGATCGCCGCCTGGATCGGCACCTCG 645 >seq817 Length=73354 Score = 95.1 bits (104), Expect = 2e-17 Identities = 135/189 (71%), Gaps = 1/189 (1%) Strand=Plus/Minus Query 101 GAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCGGCCT 160 ||||||||| | | || ||||| || ||||| | || |||||| || || || ||| Sbjct 53009 GAAGGCTTCCT-GCGGGATTTCGACCTTGCCGAACTGCCGCATGCGCTTCTTGCCTTCCT 52951 Query 161 TTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCAGTA 220 | ||||| || || ||||||||||| || ||||| ||||| |||||||| ||| | Sbjct 52950 TCTGCTTTTCCAGAAGCTTGCGCTTGCGCGAGACGTCGCCGCCATAGCATTTTGCCGTCA 52891 Query 221 CGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCCAATGGCGGCCT 280 ||| ||| | || ||| || || ||||| || | | ||||| ||||| |||| Sbjct 52890 CGTCCTTGCGCAGGGCCGAGATGGTTTCACGCGCGATCACCGTGCCGCCGATGGCCGCCT 52831 Query 281 GGATCGCGA 289 |||||| || Sbjct 52830 GGATCGGGA 52822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838287805312