Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq1838 437 2e-120 seq1328 286 8e-75 seq446 224 2e-56 seq445 183 7e-44 seq2185 129 1e-27 seq4 116 9e-24 >seq1838 Length=1451 Score = 437 bits (484), Expect = 2e-120 Identities = 350/417 (84%), Gaps = 10/417 (2%) Strand=Plus/Plus Query 4 CTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 ||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||| Sbjct 495 CTTTACAACCCGAAGGCCTTCTTCACCCACGCGGTATGGCTGGATCAGGCTTGCGCCCAT 554 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 555 TGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 614 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183 |||||| |||||||||||||||||||| |||||||||||| |||||||| |||||||||| Sbjct 615 TGGCTGATCATCCTCTCAGACCAGCTACGGATCGTCGCCTTGGTGGGCCTTTACCCCGCC 674 Query 184 AACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTG 243 ||||||||||||| | | || ||||| | | |||||||||||||||| ||| Sbjct 675 AACTAGCTAATCCGACATCGGCTCATCTATCCGCGCAAGGCCCGAAGGTCCCCTGCTT-- 732 Query 244 GTCTTGCGACG---TTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCA 300 || ||| | |||||||||||||| |||||| |||||||||| | | | Sbjct 733 -TCACCCGAAGGTCGTATGCGGTATTAGCGTAAGTTTCCCTACGTTATCCCCCACGAAAA 791 Query 301 GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGA-AGCAGCAAGCTGCT 359 || || |||| | ||| ||||||||||||||||||| || | | | |||||||| || Sbjct 792 GGTAGATTCCGATGTATTCCTCACCCGTCCGCCACTCGCCACCCATAAGAGCAAGCT-CT 850 Query 360 TCCTGT--TACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 | |||| | |||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct 851 TACTGTGCTGCCGTTCGACTTGCATGTGTTAGGCCTACCGCCAGCGTTCACTCTGAG 907 >seq1328 Length=80990 Score = 286 bits (316), Expect = 8e-75 Identities = 188/208 (90%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 4 CTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 ||||||||||| | ||||||| ||| ||||||||||||||| ||||||||||||||||| Sbjct 3771 CTTTACAACCCTAGGGCCTTCATCACTCACGCGGCATGGCTGGATCAGGCTTGCGCCCAT 3830 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 ||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct 3831 TGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTG 3890 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183 |||||| |||||||||||||||||||| |||||||||||| ||| |||| ||||||| || Sbjct 3891 TGGCTGATCATCCTCTCAGACCAGCTATGGATCGTCGCCTTGGTAGGCCTTTACCCCACC 3950 Query 184 AACTAGCTAATCCCATCTGGGTTCATCC 211 ||||||||||||| | ||| |||||| Sbjct 3951 AACTAGCTAATCCAACGCGGGCTCATCC 3978 >seq446 Length=116643 Score = 224 bits (248), Expect = 2e-56 Identities = 307/423 (73%), Gaps = 28/423 (7%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCT-TCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 ||||| |||| ||| || ||||| | ||||||||||||||| |||| || | |||| Sbjct 745 TTTACGACCCAGAGGGCTGTCTTCCTGCACGCGGCATGGCTGGTTCAGAGTTCCCTCCAT 686 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 || ||||||||| ||||||||||||||||||||||||| |||||||||||| |||||| Sbjct 685 TGACCAATATTCCTTACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCTCAGTACCAGTG 626 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183 ||| ||||||||||||||| | |||| |||||||||| |||||||| |||||||||| Sbjct 625 TGGGGGGTCATCCTCTCAGATCCCCTAGTCATCGTCGCCTTGGTGGGCCGTTACCCCGCC 566 Query 184 AACTAGCTAAT----------CCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGG-T 232 ||||||||||| |||||| || |||| ||| | | | || | Sbjct 565 AACTAGCTAATGACACGCATGCCCATC----TTAATCCTATAAATATTTGAACATTGGAT 510 Query 233 CCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCC 292 || || || | ||||||||| ||| | |||| || ||||||| Sbjct 509 AATGCT-----ATCCTGTGTTTTTATGCGGTCTTAATCCGAATTTCTTCGGGCTATCCCC 455 Query 293 CTCCATCAGGCA-GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGC 351 || | ||| | ||| | | | |||| ||||||| ||||||| ||| ||| ||| Sbjct 454 CTGATTAAGGTAGGTTGCATACGCGTTACGCACCCGTGCGCCACT-TTCA--TAAGAAGC 398 Query 352 AAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCT 411 |||| ||| | | |||||||||||||||| ||||||||||||| |||||||| || Sbjct 397 AAGCCTCTTAATCT---CGTTCGACTTGCATGTATTAGGCCTGCCGCTAGCGTTCATCCT 341 Query 412 GAG 414 ||| Sbjct 340 GAG 338 >seq445 Length=5314 Score = 183 bits (202), Expect = 7e-44 Identities = 156/191 (82%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGG-CCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 ||||||| || ||| || || || | ||||||||||||||| |||||||||||||||| Sbjct 565 TTTACAATCCATAGGACCGTCATCCTGCACGCGGCATGGCTGGTTCAGGCTTGCGCCCAT 506 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 || ||||||||| |||||||||||||||||||||||||| |||||||||||| |||||| Sbjct 505 TGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCTCAGTACCAGTG 446 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183 ||| | || |||||||| | ||| ||||| |||| ||| ||| ||||| || Sbjct 445 TGGGGGATCTCCCTCTCAGGACCCCTACCCATCGTAGCCTTGGTAAGCCGTTACCTTACC 386 Query 184 AACTAGCTAAT 194 ||||||||||| Sbjct 385 AACTAGCTAAT 375 >seq2185 Length=1414 Score = 129 bits (142), Expect = 1e-27 Identities = 82/89 (92%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 ||||||||||||||||| || || |||||||| | ||||||||||||||||||||||| Sbjct 1326 TTTACAACCCGAAGGCCGTCGTCCCTCACGCGGCGTTGCTGCATCAGGCTTGCGCCCATT 1385 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGT 93 ||||||||||||||||||||||||||||| Sbjct 1386 GTGCAATATTCCCCACTGCTGCCTCCCGT 1414 >seq4 Length=33404 Score = 116 bits (128), Expect = 9e-24 Identities = 130/172 (76%), Gaps = 4/172 (2%) Strand=Plus/Minus Query 21 CTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCAC 80 ||||||| |||| | || |||| |||| |||| ||| |||||| ||||||||||||| Sbjct 14344 CTTCTTCCCCCACGTGATATTGCTGGATCAAGCTTTCGCTCATTGTCCAATATTCCCCAC 14285 Query 81 TGCTGCCTCCCGTA-GGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCT 139 ||||||||| || ||| ||| | | | ||| ||||| |||||||| |||||||| Sbjct 14284 TGCTGCCTC---TATCGAGGTTGGTCTTTCTTTCAATTCCAATGTGGCTGATCATCCTCC 14228 Query 140 CAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCT 191 ||||||| ||| | ||| | | || | | ||| |||||| ||||||| || Sbjct 14227 CAGACCAACTACGAATCTTTGGCTTGTTTGGCTTTTACCCTTCCAACTACCT 14176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222236418432