Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq1328 417 2e-114 seq2185 356 6e-96 seq1838 352 7e-95 seq445 306 9e-81 seq446 298 1e-78 seq4 87.8 4e-15 >seq1328 Length=80990 Score = 417 bits (462), Expect = 2e-114 Identities = 334/400 (84%), Gaps = 2/400 (1%) Strand=Plus/Minus Query 9 GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA 68 || |||||||||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct 3735 GAAGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTG 3676 Query 69 TCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCT 128 | |||| ||||||||||||||| | |||||| || | ||||||||| ||||||| | Sbjct 3675 TTCGGATTTACTGGGCGTAAAGCGCACGTAGGCGGACTATTAAGTCAGGGGTGAAATCCC 3616 Query 129 ATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTG 188 ||||||||||||| ||||| ||||| |||| | || |||| | ||| || |||| Sbjct 3615 GGGGCTCAACCCCGGAACTGCCTTTGATACTGGTAGTCTTGAGTTCGAGAGAGGTGAGTG 3556 Query 189 GAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCG 248 ||||||| ||||||| |||||||| |||||||||| |||||||||||||||||||||||| Sbjct 3555 GAATTCCGAGTGTAGAGGTGAAATTCGTAGATATTCGGAGGAACACCAGTGGCGAAGGCG 3496 Query 249 GCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGAT 308 ||| |||| | |||||| |||||| |||||||||||||||||||||||||||||| Sbjct 3495 GCTCACTGGCTCGATACTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGAT 3436 Query 309 ACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCG 368 |||||||||||||||||||||||| |||| |||| |||||| | || | || | || Sbjct 3435 ACCCTGGTAGTCCACGCCGTAAACTATGAGAGCTAGCCGTCGGGCAGTAT-ACTG-TTCG 3378 Query 369 GTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 ||| ||||||||||||| |||| ||| ||||||||||| Sbjct 3377 GTGGCGCAGCAAACGCATTAAGCTCTCCGCCTGGGGAGTA 3338 >seq2185 Length=1414 Score = 356 bits (394), Expect = 6e-96 Identities = 319/398 (80%), Gaps = 3/398 (1%) Strand=Plus/Minus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct 1280 AAGCGCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGCGCAAGCGTTATCCG 1221 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||||| ||||||||||| | |||||| ||||| | ||| | |||||| | || Sbjct 1220 GAATTATTGGGCGTAAAGAGCTCGTAGGCGGTTTGTCGCGTCTGCTGTGAAATCCGGAGG 1161 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192 ||||||| | || |||| | | || | | ||||||||| | ||||| | |||||| Sbjct 1160 CTCAACCTCCGGCCTGCAGTGGGTACGGGCAGACTAGAGTGCGGTAGGGGAGATTGGAAT 1101 Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252 |||| ||||||||||| |||||| |||||| |||||||||||| |||||||||| | | Sbjct 1100 TCCTGGTGTAGCGGTGGAATGCGCAGATATCAGGAGGAACACCGATGGCGAAGGCAGATC 1041 Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312 |||| | ||||||||| |||||| |||||| |||||||||||||||| |||||||||| Sbjct 1040 TCTGGGCCGTAACTGACGCTGAGGAGCGAAAGGGTGGGGAGCAAACAGGCTTAGATACCC 981 Query 313 TGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT--AAGTGCTCCGGT 370 ||||||||||| ||||||||| || ||||| ||| |||| ||| | | | | || Sbjct 980 TGGTAGTCCACCCCGTAAACGTTGGGAACTAGTTGT-GGGGTCCATTCCACGGATTCCGT 922 Query 371 GCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | |||||| |||||| ||||| || ||||||||||| Sbjct 921 GACGCAGCTAACGCATTAAGTTCCCCGCCTGGGGAGTA 884 >seq1838 Length=1451 Score = 352 bits (390), Expect = 7e-95 Identities = 318/397 (80%), Gaps = 2/397 (1%) Strand=Plus/Minus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| |||||||||| |||||||||||||||||||||||| |||| || ||||||| || Sbjct 430 AAGCACCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGTGCAAGCGTTACTCG 371 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||||||||||||||||| |||||||||||||| ||||||| | ||||||| | || Sbjct 370 GAATTACTGGGCGTAAAGCGTGCGTAGGTGGTTGTTTAAGTCTGTTGTGAAAGCCCTGGG 311 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192 ||||||| || | ||| | || |||| | |||||||| | || || |||||||| Sbjct 310 CTCAACCTGGGAATTGCAGTGGATACTGGGCGACTAGAGTGTGGTAGAGGGTAGTGGAAT 251 Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252 ||| ||||||| |||||||||||||| || ||||||||| | |||||||||| ||| Sbjct 250 TCCCGGTGTAGCAGTGAAATGCGTAGAGATCGGGAGGAACATCCATGGCGAAGGCAGCTA 191 Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312 |||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 190 CCTGGACCAACACTGACACTGAGGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 131 Query 313 TGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTC-CGGTG 371 |||||||||||||| ||||||||| ||| | ||| ||| ||| || | | || Sbjct 130 TGGTAGTCCACGCCCTAAACGATGCGAACTGGATGT-TGGGTGCAATTTGGCACGCAGTA 72 Query 372 CCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 || ||| ||||| ||||| || ||||||||||| Sbjct 71 TCGAAGCTAACGCGTTAAGTTCGCCGCCTGGGGAGTA 35 >seq445 Length=5314 Score = 306 bits (338), Expect = 9e-81 Identities = 307/392 (78%), Gaps = 10/392 (3%) Strand=Plus/Plus Query 19 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTA 78 ||||||||| |||||||||||||||||||||||| ||| | ||||||||||||||| | Sbjct 631 CGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATCCAAGCGTTATCCGGAATCA 690 Query 79 CTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAAC 138 |||| |||||||| |||||| ||||| |||||||| |||||||| | || ||||||| Sbjct 691 TTGGGTTTAAAGGGTCCGTAGGCGGTTTGGTAAGTCAGTGGTGAAAGCCCATCGCTCAAC 750 Query 139 CCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGG-GGCAAGTGGAATTCCTA 197 || || || |||| ||||| | || || | | ||| | || | |||| || Sbjct 751 GGTGGAACGGCCATTGATACTGCTGAACTTGAAT-TATTAGGAAGTAACTAGAATATGTA 809 Query 198 GTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCT-G 256 ||||||||||||||||| ||||||||| |||| |||| | |||||||| | || || Sbjct 810 GTGTAGCGGTGAAATGCTTAGATATTACATGGAATACCAATTGCGAAGGCAGGTTACTAC 869 Query 257 GACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGT 316 | || | |||| |||| | |||||||||||||||| ||||||||||||||||||||| Sbjct 870 TAATG-GATTGACGCTGATGGACGAAAGCGTGGGGAGCGAACAGGATTAGATACCCTGGT 928 Query 317 AGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTGCCGCA 376 |||||||||||||||||||| ||||||| ||| |||| ||| || | ||| | | Sbjct 929 AGTCCACGCCGTAAACGATGGATACTAGCTGTTGGGG-GCA-----ACTTCAGTGGCTAA 982 Query 377 GCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 || || | |||||||| |||||||||||||| Sbjct 983 GCGAAAGTGATAAGTATCCCACCTGGGGAGTA 1014 >seq446 Length=116643 Score = 298 bits (330), Expect = 1e-78 Identities = 304/394 (77%), Gaps = 12/394 (3%) Strand=Plus/Plus Query 19 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTA 78 ||||||||| |||||||||||||||||||||||| ||| | ||||||||||||| ||| Sbjct 811 CGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATCCAAGCGTTATCCGGATTTA 870 Query 79 CTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAAC 138 |||| ||||||||||||||| || || ||||||||| |||||||| | ||||||||| Sbjct 871 TTGGGTTTAAAGGGTGCGTAGGCGGCTTATTAAGTCAGGGGTGAAAGACGGTGGCTCAAC 930 Query 139 CCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAG 198 | | | ||| |||| |||| | ||| || | || || || | | ||||| Sbjct 931 CATCGCAGTGCCCTTGATACTGATGAGCTTGAATACACTAGAGGTAGGCGGAATGTGACA 990 Query 199 TGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGA 258 ||||||||||||||| ||||||| ||||||| | |||||||| |||| || Sbjct 991 AGTAGCGGTGAAATGCATAGATATGTCACAGAACACCGATTGCGAAGGCAGCTTACTATG 1050 Query 259 CTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAG 318 ||| | |||| ||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct 1051 GTGTTATTGACGCTGAGGCACGAAAGCGTGGGGATCAAACAGGATTAGATACCCTGGTAG 1110 Query 319 TCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGT--GCCGC- 375 |||||||| ||||||||||||||| | ||| | | ||| | | || || || Sbjct 1111 TCCACGCCCTAAACGATGAATACTCGCTGTTAGCG---ATA-----TACAGTTAGCGGCT 1162 Query 376 -AGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 ||| || || |||||||||||||||||||||| Sbjct 1163 AAGCGAAAGCGTTAAGTATTCCACCTGGGGAGTA 1196 >seq4 Length=33404 Score = 87.8 bits (96), Expect = 4e-15 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 9 GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA 68 || |||||||||| ||| | |||||||||| ||||||||| ||| | ||||| || ||| Sbjct 14393 GAAGAAGCCCCGGTTAATTTCGTGCCAGCAACCGCGGTAAAACGGAAGGGGCAAGTATTA 14452 Query 69 TCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTT 106 | || || | |||||||||||||| ||||| |||| Sbjct 14453 TTCGTAAGGATTGGGCGTAAAGGGTATGTAGGCAGTTT 14490 Score = 73.4 bits (80), Expect = 1e-10 Identities = 58/70 (83%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 266 TGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGC 325 |||| |||||| |||| || | |||||| |||||||||||| |||||||||||| | || Sbjct 14653 TGACGCTGAGGTACGAAGGCATAGGGAGCGAACAGGATTAGAGACCCTGGTAGTCTATGC 14712 Query 326 CGTAAACGAT 335 |||||| || Sbjct 14713 AGTAAACAAT 14722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203038987776