Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq371 125 1e-26 seq4894 120 6e-25 >seq371 Length=13317 Score = 125 bits (138), Expect = 1e-26 Identities = 186/259 (72%), Gaps = 5/259 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTC-AAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||||||| | ||| ||| | |||||| |||||||||||||||||||| Sbjct 5178 CTTCTTAGAGGGACTTCCAGCTTTAAGTTGGAGGAAGTCCGAGGCAATAACAGGTCTGTG 5237 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAA-CGAGTTCATC 189 |||||||||||| | ||||||||||||| |||||| || | || || | | | Sbjct 5238 ATGCCCTTAGATATCTTGGGCCGCACGCGTGCTACAATGTAGGCGCTAATAGGCATTTTA 5297 Query 190 ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 |||| || |||| ||||| || || | | |||| ||||||| || || | Sbjct 5298 CCCTTTACCTAGAGGTAGAGGTAACCT--ACAATCCCCTACGTGATGGGGATTGACCACT 5355 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 | || | || || |||||||||||| ||| ||| ||| | |||| | | | || || Sbjct 5356 GTAACT-GTGGTCATCAACGAGGAATTCCTTGTAGGCGTGCGTCACTATCGCACGCCGAA 5414 Query 310 TACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 5415 TCTGTCCCTGCCCTTTGTA 5433 >seq4894 Length=208 Score = 120 bits (132), Expect = 6e-25 Identities = 151/207 (73%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 122 AGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACG 181 ||||||||||||||||||||| |||||||||||||||||||| || || ||| Sbjct 1 AGGTCTGTGATGCCCTTAGATACCTTGGGCCGCACGCGCGCTACAATGTAGGAAACAAAA 60 Query 182 AGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGAT 241 || | ||| | |||||||| ||||||||| | | || || ||| ||| | Sbjct 61 AGG----CTCCTGGTCCGGAAGGATTGGGTAATCATTTGAATTTCCTACGTAACTGGGCT 116 Query 242 AGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCAC 301 || | ||| |||||||| || | |||||||||| ||| ||||||| ||||| | | Sbjct 117 TGATCTTTGTAATTATTGATCATAAACGAGGAATTCCTTGTAAGCGTAAGTCATTACCTT 176 Query 302 GCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||| || |||||||||||||||| Sbjct 177 ATGCTGAATATGTCCCTGCCCTTTGTA 203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947073245696