Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq446 430 4e-118 seq3111 379 7e-103 seq445 370 4e-100 seq2288 361 2e-97 seq1328 307 4e-81 >seq446 Length=116643 Score = 430 bits (476), Expect = 4e-118 Identities = 440/564 (78%), Gaps = 9/564 (2%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCG-ACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| ||| |||||| | |||| || |||||| ||||||| ||||||||||||| Sbjct 3051 CGAGTCTGAATAGGGCGTATAGTCAGGGGAGGTAGACGCGAAACCTTGTGATCTACCCAT 3110 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 || |||| |||||||||||||||||| ||||||| ||||||| | || |||||||| | Sbjct 3111 GGACAGGTTGAAGGTGCGGTAACACGTACTGGAGGACCGAACCGATAAACGTTGAAAAGT 3170 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 | |||||| |||||||||||||||||||||||| |||||| |||||||||| || ||| Sbjct 3171 TTCCGGATGATCTGTGGGTAGGGGTGAAAGGCTAATCAAACTGGGAAATAGCTCGTACTC 3230 Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAG-TATCACCATCGGG-GGTAGAGC-ACTGTTA 237 |||||| | |||||| | || | || || || | |||||||| |||| | Sbjct 3231 CCCGAAATGTTTTTAGGAACAGCGTTGAGGTAAAGTTATTTAGAGGTAGAGCTACTGAT- 3289 Query 238 TGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTT 297 ||| | |||| | | ||||||| | |||||||||||||| | | | | Sbjct 3290 TGGGTGCGGGGGAGTCAAATCCTACCAAATCCAGACAAACTCCGAATGCTAAATAATATA 3349 Query 298 ACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACT 357 | | | ||||||| | ||||||||||||| | |||||||| ||||| || ||| Sbjct 3350 --CTCAGCAGTGAGGCCCGGGGTGCTAAGGTCACGGGCCGAGAGGGAAAGAACCCAGACC 3407 Query 358 ATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACA 417 ||||||||||| ||| || | || ||||||| ||||||||| || |||||| ||||| Sbjct 3408 ATCAGCTAAGGTCCCCAAGTTACTACTAAGTTGAACTAACGAGGTGCGATTGCATAGACA 3467 Query 418 GCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTC 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3468 GCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTC 3527 Query 478 GAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTGGG-ATCA 536 ||| ||| || |||||||||| |||| ||||||| || |||||||| |||| | | Sbjct 3528 GAGCGATCGTGCATGGATAATAAACGGGCATTAAGTAGTACACCGAAGCTATGGGTAATA 3587 Query 537 TTTATATGATCGGTAGGGGAGCAT 560 || |||| | |||||||||||||| Sbjct 3588 TTAATATTA-CGGTAGGGGAGCAT 3610 >seq3111 Length=1418 Score = 379 bits (420), Expect = 7e-103 Identities = 378/483 (78%), Gaps = 9/483 (2%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| || |||||| | |||||||||| ||||||||||||| | |||||| |||| Sbjct 223 CGAGTCTTAATAGGGCGTCTAGTCGCTGGGAATAGACCCGAAACCGGGCGATCTATCCAT 282 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 || |||| ||||||| |||||||| ||||||| ||||||| |||| |||||||| | Sbjct 283 GGGCAGGTTGAAGGTTGGGTAACACTAACTGGAGGACCGAACCGACTACCGTTGAAAAGT 342 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 ||| |||||| |||||| | || |||||||||||| ||| || ||| ||||||||||||| Sbjct 343 TAGCGGATGACCTGTGGATCGGAGTGAAAGGCTAATCAAGCTCGGAGATAGCTGGTTCTC 402 Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATCGGGGGTAGAGCACTGTTATGG 240 ||||| |||||||||||| |||||| ||||||| | ||||||||||||||||| || Sbjct 403 CTCGAAAGCTATTTAGGTAGCGCCTCATGTATCACTGTAGGGGGTAGAGCACTGTTTCGG 462 Query 241 CTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGT-TTTAC 299 |||||||||||| |||||||||||||| |||||||||||||| | | ||| | Sbjct 463 CTAGGGGGTCATCCCGACTTACCAAACCGATGCAAACTCCGAATACCTACAAGTGCCGAG 522 Query 300 CGCGGGAG--TGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACT 357 | ||||| | ||| ||||||||| |||||| | ||| || || || ||| Sbjct 523 CATGGGAGACACACGGC--GGGTGCTAACGTCCGTCGTGAAAAGGGAAACAACCCAGACC 580 Query 358 ATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACA 417 |||||||||| ||| || | | | ||||| | ||||| || || ||| ||||| Sbjct 581 GTCAGCTAAGGTCCCAAAGTTATGGTTAAGTGGGA--AACGATGTGGGAAGGCTTAGACA 638 Query 418 GCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTC 477 ||||||| |||||||| |||||||||| | |||||||| |||||| |||||||||||| Sbjct 639 GCTAGGAGGTTGGCTTAGAAGCAGCCA-CCCTTTAAAGAAAGCGTAATAGCTCACTAGTC 697 Query 478 GAG 480 ||| Sbjct 698 GAG 700 >seq445 Length=5314 Score = 370 bits (410), Expect = 4e-100 Identities = 406/532 (76%), Gaps = 11/532 (2%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGAC--AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59 |||||| ||| |||||| |||| | | ||||| ||||||| |||||||||||| Sbjct 2833 CGAGTCTGAATAGGGCGCTTTAGTCAGTAGTGTTAGACGCGAAACCGTGTGATCTACCCA 2892 Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119 ||| |||| ||||| || |||||||| | |||||| ||||||| | | |||||||| Sbjct 2893 TGGGCAGGTTGAAGCTGTGGTAACACACAGTGGAGGACCGAACCGGTTGACGTTGAAAAG 2952 Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179 | |||||| ||||||||||||||||||||| || |||||| |||||||||| || || Sbjct 2953 TCTTCGGATGACCTGTGGGTAGGGGTGAAAGGCCAATCAAACTCGGAAATAGCTCGTACT 3012 Query 180 CTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATCG---GGGGTAGAGC-ACTGT 235 | |||||| |||||||| || | | ||| | | | |||||||| |||| Sbjct 3013 CCCCGAAATGCATTTAGGTGCAGCGTTAGTTATAAAGTTATATAGAGGTAGAGCTACTGA 3072 Query 236 TATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC-GCATCAGT 294 | ||| | |||| | | | | |||||| | | |||||||||||||| | || | Sbjct 3073 T-TGGATGCGGGGGCTTCACCGCCTACCAATTCCTGACAAACTCCGAATGCTGTATAATG 3131 Query 295 TTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGG 354 || || ||||||||| ||||||||||||||| | |||||||| ||||| || | Sbjct 3132 TTCACTAAC--AGTGAGGGCTTGGGTGCTAAGGTCCAAGTCCGAGAGGGAAAGAACCCAG 3189 Query 355 ACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAG 414 || ||||||||||| ||| |||| |||||||| || ||||| || || ||| || Sbjct 3190 ACCATCAGCTAAGGTCCCCAAATATATGCTAAGTTGAAAGAACGAGGTTTGTCTGCCCAG 3249 Query 415 ACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTA 474 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3250 ACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTA 3309 Query 475 GTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGC 526 |||||| | || || ||||||||||||||| | |||| ||||||||| Sbjct 3310 GTCGAGCGGACGAGCATGGATAATAATCGGGCA-TAAGCATATTACCGAAGC 3360 >seq2288 Length=2140 Score = 361 bits (400), Expect = 2e-97 Identities = 375/483 (78%), Gaps = 10/483 (2%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCG-ACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| || |||||| | |||||| || |||||||||||||| |||||||| ||| Sbjct 934 CGAGTCTGATAAGGGCGCATAGTCGCGGGCAGTAGACCCGAAACCGGGTGATCTAGTCAT 993 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 ||||||| ||||||||| |||||| | ||||||| |||||||||| ||||| |||| Sbjct 994 GGCCAGGGTGAAGGTGCCGTAACAGGTACTGGAGGCCCGAACCCACGTCTGTTGCAAAAG 1053 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 |||||||||||||| |||| |||||| ||||| | ||| ||| ||||||||||||| Sbjct 1054 ACGGGGATGAGCTGTGATTAGGAGTGAAAAGCTAATCGAACCCGGAGATAGCTGGTTCTC 1113 Query 181 TCCGAAAACTATTTAGGTAGTGCCTC--AAGTATCACCATCGGGGGTAGAGCACTGTTAT 238 ||||| |||||||||||| ||||| | ||||| | ||||||||||||||||||||| Sbjct 1114 CTCGAAAGCTATTTAGGTAGCGCCTCATATGTATC-CTCTCGGGGGTAGAGCACTGTTAT 1172 Query 239 GGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAAT-GCGCATCAGTTTT 297 |||||||||||||| ||||||||||||||||||||||||||||||| || | | | Sbjct 1173 GGCTAGGGGGTCATCGCGACTTACCAAACCATTGCAAACTCCGAATACCGAGACGGACTG 1232 Query 298 ACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACT 357 | | || | ||| ||||||||| |||||| | ||| || || || ||| Sbjct 1233 TATGGGAGACACACGGC--GGGTGCTAACGTCCGTCGTGAAAAGGGAAACAACCCAGACC 1290 Query 358 ATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACA 417 ||||||||| ||| || | || ||||||| || ||| | || | || ||||| Sbjct 1291 CACAGCTAAGGTCCCAAATTCACTGCTAAGTGGAA--AACCATGTGGAAAGGCACAGACA 1348 Query 418 GCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTC 477 || |||| |||||||| |||||||||| | |||||||| |||||| |||||||| ||| Sbjct 1349 GCCAGGAGGTTGGCTTAGAAGCAGCCA-CCCTTTAAAGAAAGCGTAATAGCTCACTGGTC 1407 Query 478 GAG 480 ||| Sbjct 1408 GAG 1410 >seq1328 Length=80990 Score = 307 bits (340), Expect = 4e-81 Identities = 361/480 (75%), Gaps = 10/480 (2%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGA-CAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| |||||||||| |||| | || ||||||||||||||||||||||| |||| Sbjct 1063 CGAGTCTGAACAGGGCGTTCAGTTCGTCGGATTAGACCCGAAACCAAGTGATCTAGCCAT 1004 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 | |||| ||||||| |||||||| ||||||| |||||||| | ||||| || | Sbjct 1003 GAGCAGGTTGAAGGTAAGGTAACACTTACTGGAGGACCGAACCCGCATCTGTTGCAATAG 944 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 ||||||| ||||| |||||||||||||| || |||||||||| ||||||||||||| Sbjct 943 ATTGGGATGACTTGTGGCTAGGGGTGAAAGGCCAATCAAACTTGGAGATAGCTGGTTCTC 884 Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAA--GTATCACCATCGGGGGTAGAGCACTGTTAT 238 ||||| |||||||||||| || || | | || ||| ||||||||||||||||| Sbjct 883 CGCGAAATCTATTTAGGTAGAGCGTCGATCGAAT-ACCTTCGGGGGTAGAGCACTGGATG 825 Query 239 GGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGT-TTT 297 ||||||||| || ||| |||||||||| |||||||||||| | | ||| | Sbjct 824 GGCTAGGGGATCTCACCGATTTACCAAACCTAACCAAACTCCGAATACCGAAGAGTACTA 765 Query 298 ACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACT 357 | || || | ||| ||||||||| |||||| ||||| || || || ||| Sbjct 764 ATCGGCAGACACACGGC--GGGTGCTAACGTCCGTCGTGAAGAGGGCAACAACCCTGACC 707 Query 358 ATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACA 417 | || |||||| ||| || | | ||||||| | || || || | | | || ||| Sbjct 706 ACCATCTAAGGTCCCTAAGTTATGGCTAAGTGGGA--AAGGATGTGAGGATCCCAAAACA 649 Query 418 GCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTC 477 | ||||||||||||| |||||||||| ||||||||||| ||||||||||||||| ||| Sbjct 648 ACCAGGATGTTGGCTTAGAAGCAGCCA-TCATTTAAAGAAAGCGTAACAGCTCACTGGTC 590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689373897728