Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq3138 224 2e-56 seq2288 194 3e-47 seq446 132 9e-29 seq445 131 3e-28 seq2213 123 5e-26 seq1328 113 8e-23 seq4 73.4 7e-11 >seq3138 Length=572 Score = 224 bits (248), Expect = 2e-56 Identities = 205/257 (80%), Gaps = 9/257 (4%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| | ||||||||||||||| | | |||||||||| ||||| ||||| ||||| | Sbjct 316 AGCGCATACGGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTGGTAGCCTGCGAAA 375 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| |||||||| ||||||| ||||||||||| |||| || |||||||| ||||| || Sbjct 376 AGCTTCGGGGAGTCGGCAAACAGACTTTGATCCGGAGATGTCTGAATGGGGGAACCCAGC 435 Query 121 CCT------TTGGGT-CATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAA 173 | | ||| | | || || |||||||||||||| | ||||||| || ||| Sbjct 436 CATCATAAGATGGTTACCTTACA--CTGAATACATAGGTGTATGGAGCGAACCAGGGGAA 493 Query 174 CTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGA 233 |||||||||||||||| | |||||||||||||||||||||||||| ||||||||||| Sbjct 494 CTGAAACATCTAAGTACCCTGAGGAAAAGAAATCAACCGAGATTCCCTTAGTAGTGGCGA 553 Query 234 GCGAAATGGGATGAGCC 250 ||||| |||| |||| Sbjct 554 GCGAACGGGGACTAGCC 570 >seq2288 Length=2140 Score = 194 bits (214), Expect = 3e-47 Identities = 200/257 (78%), Gaps = 6/257 (2%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||||| |||||||||||||||| | | |||||||||||||||| | ||| ||||| | Sbjct 331 AGCGCACACGGTGGATGCCTTGGCGGTCAGAGGCGATGAAGGACGTGGCAGCCTGCGAAA 390 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 || ||||||| |||| || |||||||||| || ||||||||||||||||| | Sbjct 391 AGTATCGGGGAGCTGGCAA-CAAGCTTTGATCCGGTAATGTCCGAATGGGGAAACCCACC 449 Query 121 CCTTTG-GGTCATTGCATGC--TGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGA 177 | ||| || || | ||| ||||||||||| | |||||||| || ||||||| Sbjct 450 CGCTTGCGGGTAT--CCTGCAGTGAATACATAGCTGCTGGAAGCGAACCTGGTGAACTGA 507 Query 178 AACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGA 237 || ||||||||| | |||||||||||||||||||||||||| ||||| | ||||||| Sbjct 508 AATATCTAAGTAACCAGAGGAAAAGAAATCAACCGAGATTCCCTGAGTAGCGACGAGCGA 567 Query 238 AATGGGATGAGCCTTTA 254 | |||| |||| ||| Sbjct 568 ACGGGGACTAGCCCTTA 584 >seq446 Length=116643 Score = 132 bits (146), Expect = 9e-29 Identities = 184/251 (73%), Gaps = 15/251 (6%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||||| | |||||||||||| | | |||||||||||||||| || ||||||| Sbjct 2404 AGAGCACACAGGGGATGCCTTGGCTCTCAGAGGCGATGAAGGACGTGATAAGCTGCGATA 2463 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| |||||| | |||||| | || ||||| ||||||||||||||||||||| ||| Sbjct 2464 AGCTCCGGGGA-TTAGCAAATATGAATTAATCCGGAGATTTCCGAATGGGGAAACCTGGC 2522 Query 121 CCTTTGGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAAC 180 | | | | | | | |||| | ||| ||| ||| | |||||||||| Sbjct 2523 ----TAGTTGAAGACTAGTCG--TACA-AAGTACGCA-----AACCTGCTGAACTGAAAC 2570 Query 181 ATCTAAGT-AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAA 239 |||||||| ||| | ||||| ||||| || |||| || |||||||||||||||||| Sbjct 2571 ATCTAAGTAAGCAG-AGGAAGAGAAAATAATAATGATTTCCTAAGTAGTGGCGAGCGAAA 2629 Query 240 TGGGATGAGCC 250 || | ||||| Sbjct 2630 GGGAAAGAGCC 2640 >seq445 Length=5314 Score = 131 bits (144), Expect = 3e-28 Identities = 177/244 (73%), Gaps = 12/244 (5%) Strand=Plus/Plus Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCG 67 |||| |||||||| ||| | | |||||||||| | ||| || ||||| |||||||| Sbjct 2192 ATGGGGGATGCCTAGGCTCTCAGAGGCGATGAAAGGCGTGATAAGCTGCGAAAAGCTGCG 2251 Query 68 GGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTG- 126 |||| | ||| |||| ||||||||||||| | |||||||| |||||| ||| Sbjct 2252 GGGA-CGGGCACACACCGATTGATCCGCAGATACCTGAATGGGGCAACCCGTTATGTTGA 2310 Query 127 GGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAA 186 | ||| || | | |||||| ||| ||| || |||||||||||||||| Sbjct 2311 AGACATAACACACCG-----ATAGGTGGGCA-----AACCCGCTGAACTGAAACATCTAA 2360 Query 187 GTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATG 246 |||| | |||| |||||| ||| | |||||| ||||||||||||||||| |||| Sbjct 2361 GTAGGCGGAGGAGAAGAAAACAAAAGTGATTCCGTAAGTAGTGGCGAGCGAACGCGGATT 2420 Query 247 AGCC 250 |||| Sbjct 2421 AGCC 2424 >seq2213 Length=1110 Score = 123 bits (136), Expect = 5e-26 Identities = 180/253 (71%), Gaps = 15/253 (6%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| | ||||||||||||||| | || ||| ||||||||||| | ||||||| Sbjct 449 AGAGCAAACGGTGGATGCCTTGGCATCTGGAGCCGAAGAAGGACGTAGCAATCTGCGATA 508 Query 61 AGCTGCGGGGAG-TGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGG 119 ||| |||||| ||| || || ||||||||| | | ||||||||||||||||| | Sbjct 509 AGCCTCGGGGAACTGAT-AAGCAAGTTTTGATCCGAGGGTGTCCGAATGGGGAAACCCCG 567 Query 120 CCCTTTGG------------GTCATTGCATGCTGAATACATAGGTATGCAA-AGCGAACG 166 | || || | | | ||||||| ||||| | | || ||||| Sbjct 568 CTGGGCGGCGTGCCGACCTAGTGACTCCCGCCTGAATATATAGGGCGGGTAGAGGGAACG 627 Query 167 CGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTA 226 || ||| |||||||||| |||| | |||||| ||||| |||||| |||||| |||| Sbjct 628 TGGGGAAGTGAAACATCTCAGTACCCACAGGAAGAGAAAGCAACCGCGATTCCGTTAGTA 687 Query 227 GTGGCGAGCGAAA 239 ||||||||||||| Sbjct 688 GTGGCGAGCGAAA 700 >seq1328 Length=80990 Score = 113 bits (124), Expect = 8e-23 Identities = 96/117 (82%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| |||||||||||||||| |||||||||||||||||| || ||||||| Sbjct 1861 AGGGCATTTGGTGGATGCCTTGGCATGCACAGGCGATGAAGGACGTGATACGCTGCGATA 1802 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC 117 ||| ||||||| | || || || |||||||||| ||||||||||||||||||||| Sbjct 1801 AGCGTCGGGGAG-GTGCGAATACCCTTTGATCCGACGATTTCCGAATGGGGAAACCC 1746 Score = 105 bits (116), Expect = 1e-20 Identities = 82/98 (84%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 141 GAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAA 200 ||||||||||| | |||||||| ||| ||||||||||||||||||| | | |||||| Sbjct 1533 GAATACATAGGGGTTAGAAGCGAACCCGGGGAACTGAAACATCTAAGTACCCGGAGGAAA 1474 Query 201 AGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 || ||||| ||||| ||| ||||||||||||||||| Sbjct 1473 GGACATCAAACGAGACTCCGTAAGTAGTGGCGAGCGAA 1436 >seq4 Length=33404 Score = 73.4 bits (80), Expect = 7e-11 Identities = 58/70 (83%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 171 GAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGG 230 ||| |||||||||| |||| || |||||||||||| ||| |||||| | |||||||| Sbjct 20060 GAAGTGAAACATCTCAGTAACTAAAGGAAAAGAAATTAACAAAGATTCTGAGAGTAGTGG 20119 Query 231 CGAGCGAAAT 240 ||||||||| Sbjct 20120 TGAGCGAAAT 20129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918277099712