Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017-
01-02] 13,382 sequences; 45,801,537 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq371 412 1e-112
seq1754 205 3e-50
>seq371
Length=13317
Score = 412 bits (456), Expect = 1e-112
Identities = 269/295 (91%), Gaps = 1/295 (0%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
||||||| |||||||||||| | |||| ||||||| ||| ||||||||||||||||||
Sbjct 9392 CTCCCACCTATTCTACACCTTCCGGGTCACTTCACAA-GTCAGACTAGAGTCAAGCTCAA 9334
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 9333 CAGGGTCTTCTTTCCCCGCTATCAATGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGT 9274
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
| |||| ||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 9273 GTGGTAGTTAGGGACAGTGGGAATCTCATTTATCCATTCATGCGCGTCACTAATTAGATG 9214
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct 9213 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGTGCTAGG 9154
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531
|||||| ||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct 9153 TTGAATCTCTTCACTTTGACATTCAGAGCACTGGGCAGGAATCACCTTGCGTCAA 9099
Score = 116 bits (128), Expect = 1e-23
Identities = 90/107 (84%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||||||||| ||| ||||||| | | |||| || ||| |||||| ||||||||
Sbjct 9701 CTTTTGCTCTACGTGAGGTTTCTGTCCCCACTGAGCCCAGCTTTGGACACTTGCGTTATC 9642
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
||||||| ||||||||||||||||||||||||||||||| | ||||
Sbjct 9641 TTTTAACAAATGTGCCGCCCCAGCCAAACTCCCCACCTGAAACTGTC 9595
>seq1754
Length=363
Score = 205 bits (226), Expect = 3e-50
Identities = 222/286 (78%), Gaps = 14/286 (5%)
Strand=Plus/Plus
Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67
||||||||||| ||| |||| || ||| |||| | ||||||||||||||||||| |
Sbjct 80 TTTTGCTCTACGAGAGGTTTCCGTCCTCTCTGAGCTCGCCTTAGGACACCTGCGTTACAG 139
Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127
||| |||||||| ||||||||| |||||||||| ||||||||||||||| | ||| |||
Sbjct 140 TTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACAATGTCATCGATGCGGGTCG 199
Query 128 ---GCCCG-CGA-AGGA---CCTTAACGCCAGAAA-ATGGTCGGTGAAGACCAGTTCCGC 178
||||| ||| ||| ||||||| ||| ||| | | | | ||| || |||||
Sbjct 200 ACCGCCCGCCGAGCGGACAGCCTTAACACCAAAAACAAGAACAATAAAGTTCAATTCCGT 259
Query 179 TTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCAC--TTGCGCCGAAACGG 236
|| || || ||||||| || |||||| ||||||||||||||| ||| ||| || |
Sbjct 260 TTTATCGAATAAGTAAGGAATCGATAAAAGTAGTGGTATTTCACCGTTG-GCC--AAAGC 316
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACT 282
||||||||||| |||||||||||| | ||||||||||| ||||
Sbjct 317 CTCCCACTTATACTACACCTCTCATGATTCTTCACAAAGTCAGACT 362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1634981177536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |