Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq446 428 2e-117 seq445 399 7e-109 seq5478 224 3e-56 seq4 127 7e-27 seq2403 75.2 4e-11 >seq446 Length=116643 Score = 428 bits (474), Expect = 2e-117 Identities = 438/568 (77%), Gaps = 18/568 (3%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59 ||||||||| ||||||||||||| || ||| ||| || ||||| || ||| |||| | Sbjct 4760 TCGACTTGTCAGTCTCGCAGTCAGGCGGGCTTATGCCATTGCACTCGACGACC-GATTTC 4702 Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119 | ||| | ||||| ||| | | ||||||||||||| ||| ||||| | ||||||||| Sbjct 4701 CGACCGGTCTGAGCCCACCATCGCGCGCCTCCGTTACTCTTTAGGAGG-CGACCGCCCCA 4643 Query 120 GTTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCA 179 || ||||||||||||| ||||||||| | || ||| | || || ||||||| ||||| Sbjct 4642 GTCAAACTACCCACCATACACTGTCCCGGATCCGGATAACGGACCGCGGTTAGACATCCA 4583 Query 180 CTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAG 239 ||| || |||||||||||| | |||||||| | || ||| |||| ||| || Sbjct 4582 TATAGGTAAGGGTGGTATTTCAAGGATGACTCCACGAAGGCTGGCGCCCCCGCTTCAAAG 4523 Query 240 TCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC 299 ||| |||||||||||||||| ||| ||||||||| | |||||||||| ||||| | Sbjct 4522 TCTACCACCTATCCTACACATGCCGACACGAATGCCAGTGTAAAGCTATAGTAAAGGTGC 4463 Query 300 -CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACC 358 |||||||||| |||| |||| ||| | ||||||| || | | | ||||||||| Sbjct 4462 ACGGGGTCTTTCCGTCTAACCGCAGGAACCCCGCATCTTCACGGGGAATTCAATTTCACT 4403 Query 359 GGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACC 418 | | ||| | | |||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct 4402 GAGTCTGCGTTGGAGACAGCGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACC 4343 Query 419 CGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct 4342 CGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTT 4283 Query 479 CAATTACCCGCCTCACACACCACGTGGTGT---GCTCACGAGTCCTCTTAACCTTCCAGC 535 | ||| || || ||| | || || ||||||||||||||||| Sbjct 4282 CGATTCAATGCTTC-----------GGTTTAACCCTAACATCCCCTCTTAACCTTCCAGC 4234 Query 536 ACCGGGCAGGCGTCAGTCCGTATACCTC 563 |||||||||| ||||| || ||||| || Sbjct 4233 ACCGGGCAGGTGTCAGGCCTTATACTTC 4206 >seq445 Length=5314 Score = 399 bits (442), Expect = 7e-109 Identities = 433/566 (77%), Gaps = 25/566 (4%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| |||| ||||| ||||||||||||||| ||| || ||||| | | | || || Sbjct 4535 TCGACCTGTATGTCTCTCAGTCAAGCTCCCTTATGCCATTGCACTCTACGCACGGTTACC 4476 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | |||||||||||||| | ||||||||||| ||| ||||| | ||| |||||| Sbjct 4475 AAGCGTACTGAGGGAACCTTTAGAAGCCTCCGTTACTCTTTTGGAGG-CGACCACCCCAG 4417 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | ||||||||||||| ||| ||||||| ||| | || |||||| || Sbjct 4416 TCAAACTACCCACCAAGCAATGTCCCCC-----GATTCTCGG----GGTTAGGCCTCAGA 4366 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 || || || |||||||||||| ||||||||||| || ||| ||||| ||||||| Sbjct 4365 TAAACAAAGGGTTGTATTTCAACAATGACTCCACAACGCCTGGCGACGCCGCTTCATAGT 4306 Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC- 299 |||| |||||||||||||| | | || | |||||| |||||||||| ||||| | Sbjct 4305 CTCCAACCTATCCTACACATCATTTATCCAAGGTCAATACTAAGCTATAGTAAAGGTGCA 4246 Query 300 CGGGGTCTTTTCGTCCTGCCGCGCG-AAACGAGCATCTTTACTCGTACTGCAATTTCACC 358 | |||||||||||||| | ||| | ||||| ||||||| || |||| |||||||||| Sbjct 4245 CAGGGTCTTTTCGTCCCACTGCGGGTAAACG-GCATCTTCACCGTTACTACAATTTCACC 4187 Query 359 GGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGAACTTAC 417 | || ||| |||||||| | || ||||||| |||||||||||||||||||||||| Sbjct 4186 GAGCTCATGGCTGAGACAGT-GTCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTAC 4128 Query 418 CCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCT 477 ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 4127 CCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCT 4068 Query 478 TCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCAC 537 |||||| || || | || | | || |||||||||||||||||||| Sbjct 4067 TCAATTCAATGCTTCTC------CG----AAGATAACATCTCCTCTTAACCTTCCAGCAC 4018 Query 538 CGGGCAGGCGTCAGTCCGTATACCTC 563 |||||||| ||||| || ||||| || Sbjct 4017 CGGGCAGGTGTCAGGCCCTATACTTC 3992 >seq5478 Length=225 Score = 224 bits (248), Expect = 3e-56 Identities = 138/146 (95%), Gaps = 1/146 (1%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct 151 TCGACCTGTCAGTCTCACAGTCAAGCTCCCTTGTGCACTTACACTCGACACCTGATTGCC 92 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct 91 AACCAGGTTGAGGGAACCTTTGGGCGCCTCCGTTACTTTTTGGGA-GGCAACCGCCCCAG 33 Query 121 TTAAACTACCCACCAGGCACTGTCCC 146 |||||||||||||||||||||||||| Sbjct 32 TTAAACTACCCACCAGGCACTGTCCC 7 >seq4 Length=33404 Score = 127 bits (140), Expect = 7e-27 Identities = 96/113 (85%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 371 GAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 430 ||||||| |||| ||||||||| |||||| |||| |||| || |||| |||||||||||| Sbjct 21735 GAGACAGTAGGGAAGTCGTTACACCATTCATGCACGTCGAAAATTACTCGACAAGGAATT 21676 Query 431 TCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATT 483 |||||||||||||| || | ||||| ||||||||||||| | |||||||| Sbjct 21675 TCGCTACCTTAGGACCGTCAAGGTTACAGCCGCCGTTTACTGAGACTTCAATT 21623 >seq2403 Length=443 Score = 75.2 bits (82), Expect = 4e-11 Identities = 93/126 (74%), Gaps = 1/126 (1%) Strand=Plus/Minus Query 238 AGTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGT 297 |||||||||||||||||||||| | | | | |||| |||| || | |||||||||| Sbjct 133 AGTCTCCCACCTATCCTACACATCCTGTATCCAATGTCAATGTTAAATTGTAGTGAAGGT 74 Query 298 -CCCGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCA 356 | ||||||||| ||||| | ||| | | | || |||| || | || |||||||| Sbjct 73 GCATGGGGTCTTTCCGTCCCGTTGCGGGTACCCGGCGTCTTCACCGGGACCACAATTTCA 14 Query 357 CCGGGC 362 ||| || Sbjct 13 CCGAGC 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702172184832