Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq445 315 2e-83 seq446 307 2e-81 seq1838 192 1e-46 seq1328 190 4e-46 seq2185 91.5 3e-16 seq4 87.8 4e-15 seq8180 82.4 2e-13 >seq445 Length=5314 Score = 315 bits (348), Expect = 2e-83 Identities = 286/358 (80%), Gaps = 2/358 (1%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||||||||||||||| ||||||| || | ||| |||||| |||| Sbjct 653 GGCTGCTGGCACGGAGTTAGCCGATCCTTATTCTTACGATACCGTCAAGCTGATTCACGA 594 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 || ||| ||| | || ||||| |||||||||||| ||| ||| ||||||| ||||| Sbjct 593 ATCAGTGTTTCTTCTCGTACAAAAGCAGTTTACAATCCATAGGACCGTCATCCTGCACGC 534 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | |||||||||||| || || |||||||||||||||||||||||||||||||||||| Sbjct 533 GGCATGGCTGGTTCAGGCTTGCGCCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 474 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||| ||||||||| || |||||||| ||||||| |||| Sbjct 473 GAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGATCTCCCTCTCAGGACCCCTACCCAT 414 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATCGTACA 300 ||||| || ||| ||||||||| || |||| ||||||| |||||| | |||| | || Sbjct 413 CGTAGCCTTGGTAAGCCGTTACCTTACCAACTAGCTAATGGGACGCATGCTCATCTTTCA 354 Query 301 CCGATGAATCTTTAATGATGATACC-ATGCAATCTCATCATACCATCAGGTATTAATC 357 ||| || ||||||| | || || |||| || | |||| || ||||||||||| Sbjct 353 CCGTTGTGACTTTAATTAC-ATCCCGATGCCGGGTCGTAATACTATGAGGTATTAATC 297 >seq446 Length=116643 Score = 307 bits (340), Expect = 2e-81 Identities = 256/313 (82%), Gaps = 0/313 (0%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||||||||||||||| ||||||| | ||||||| || ||| |||||| Sbjct 833 GGCTGCTGGCACGGAGTTAGCCGATCCTTATTCCTTCGGTACATTCAGCTTCCTACACGT 774 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 ||| | ||||||||| ||||||| ||||||| | || || | || |||| ||||| Sbjct 773 AGAAAGGTTTATTCCCGAATAAAAGCAGTTTACGACCCAGAGGGCTGTCTTCCTGCACGC 714 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | ||||||||||||| | | ||||||||||||||||||| ||||||||||||||||| Sbjct 713 GGCATGGCTGGTTCAGAGTTCCCTCCATTGACCAATATTCCTTACTGCTGCCTCCCGTAG 654 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||| |||||||| | |||||||||| |||||| ||| Sbjct 653 GAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGGTCATCCTCTCAGATCCCCTAGTCAT 594 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATCGTACA 300 ||| | || ||||||||||||||||||| |||| |||||| |||||| |||||| || Sbjct 593 CGTCGCCTTGGTGGGCCGTTACCCCGCCAACTAGCTAATGACACGCATGCCCATCTTAAT 534 Query 301 CCGATGAATCTTT 313 || || ||| ||| Sbjct 533 CCTATAAATATTT 521 >seq1838 Length=1451 Score = 192 bits (212), Expect = 1e-46 Identities = 216/285 (76%), Gaps = 7/285 (2%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACA-AGCTCCC----A 55 ||||||||||||| ||||||||| ||||||||| | ||||| || | | || | Sbjct 402 GGCTGCTGGCACGAAGTTAGCCGGTGCTTATTCTTTGGGTACCGTCAGAACAACCGAGTA 461 Query 56 CACGTGGAAGG-TTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCT 114 | || | |||| || || | ||||| ||||||| ||| || ||||| || Sbjct 462 TTAATCGACTGCTTTTCTTTCCCAACAAAAGGGCTTTACAACCCGAAGG-CCTTCTTCAC 520 Query 115 TCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTC 174 ||||| ||||||| |||| || || |||||| |||||||||| |||||||||||| Sbjct 521 CCACGCGGTATGGCTGGATCAGGCTTGCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 580 Query 175 CCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCT 234 |||||||||| |||||||||||||||||||| ||||| || | |||||||||| | || Sbjct 581 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGATCATCCTCTCAGACCAGCT 640 Query 235 ATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 | ||||| | || |||||||| |||||||||| |||| ||||| Sbjct 641 ACGGATCGTCGCCTTGGTGGGCCTTTACCCCGCCAACTAGCTAAT 685 >seq1328 Length=80990 Score = 190 bits (210), Expect = 4e-46 Identities = 182/232 (78%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 82 AAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCT 141 ||||| ||||||| || ||| |||||||| |||||| | ||||||| |||| || Sbjct 3765 AAAGAGCTTTACAACCC-TAGGGCCTTCATCACTCACGCGGCATGGCTGGATCAGGCTTG 3823 Query 142 CGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGT 201 || |||||| |||||||||| |||||||||||||||||||||| ||| |||||||||||| Sbjct 3824 CGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGT 3883 Query 202 TCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTA 261 ||| ||||| || | |||||||||| | |||| ||||| | || ||| |||| ||| Sbjct 3884 CCCAGTGTGGCTGATCATCCTCTCAGACCAGCTATGGATCGTCGCCTTGGTAGGCCTTTA 3943 Query 262 CCCCGCCTACTACCTAATGGAACGCATCCCCATCGTACACCGATGAATCTTT 313 |||| || |||| ||||| ||||| | |||| | ||||| ||||||| Sbjct 3944 CCCCACCAACTAGCTAATCCAACGCGGGCTCATCCATCTCCGATAAATCTTT 3995 >seq2185 Length=1414 Score = 91.5 bits (100), Expect = 3e-16 Identities = 126/178 (71%), Gaps = 15/178 (8%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||| ||||||||| |||| ||| |||||| || || | Sbjct 1252 GGCTGCTGGCACGTAGTTAGCCGGCGCTTTTTCTGCAGGTACCGTCACTTTCGC------ 1305 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 || |||||| ||||||| |||||||| ||| || || || ||| |||||| Sbjct 1306 --------TTCTTCCCTGCTAAAAGAGGTTTACAACCCGAAGG-CCGTCGTCCCTCACGC 1356 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGT 178 | | |||| |||| || || |||||| ||||||||| |||||||||||||||| Sbjct 1357 GGCGTTGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGT 1414 >seq4 Length=33404 Score = 87.8 bits (96), Expect = 4e-15 Identities = 141/199 (71%), Gaps = 9/199 (5%) Strand=Plus/Minus Query 79 ATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGAC 138 ||||||| ||||||| | | || |||| ||| |||| | | ||||| ||| | Sbjct 14366 ATAAAAGGGGTTTACATTTC-TA----CTTCTTCCCCCACGTGATATTGCTGGATCAAGC 14312 Query 139 TCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTA-GGAGTTTGGACCGTGTCT 197 | ||| ||||| |||||||||| |||||||||||| || ||| |||| | | | | Sbjct 14311 TTTCGCTCATTGTCCAATATTCCCCACTGCTGCCTC---TATCGAGGTTGGTCTTTCTTT 14255 Query 198 CAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCC 257 || ||||||||||| || | ||||| |||| | ||| ||| | |||| | | ||| Sbjct 14254 CAATTCCAATGTGGCTGATCATCCTCCCAGACCAACTACGAATCTTTGGCTTGTTTGGCT 14195 Query 258 GTTACCCCGCCTACTACCT 276 |||||| || ||||||| Sbjct 14194 TTTACCCTTCCAACTACCT 14176 >seq8180 Length=713 Score = 82.4 bits (90), Expect = 2e-13 Identities = 146/207 (71%), Gaps = 11/207 (5%) Strand=Plus/Minus Query 75 CCTTAT-AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTT 133 |||||| |||||| |||||| | || |||| ||| |||| | | ||||| | Sbjct 708 CCTTATTAAAAGAGGTTTACGCTT--TA----CTTCTTCCCTCACTCAGTGTAGCTGGAT 655 Query 134 CAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGT 193 || || || ||||| ||||||||||| ||||| |||| | | |||||||| | | Sbjct 654 CAAGCTTGCGCTCATTGTCCAATATTCCTTACTGCAGCCT--CTTCAGAGTTTGGTCGTT 597 Query 194 GTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACC-CCTATCCATCGTAGGCTAGGT 252 | ||| | ||||||||| || | | ||||| ||||| |||| ||| ||| | ||| Sbjct 596 CTTTCAATACCAATGTGGATGATCATTCTCTC-GAACCACCTACGAATCTCAGGTTTGGT 538 Query 253 GGGCCGTTACCCCGCCTACTACCTAAT 279 ||| ||||||| || ||| |||||| Sbjct 537 AAGCCTTTACCCCACCAACTGCCTAAT 511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068656973184