Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq371 190 6e-46 seq4248 183 9e-44 seq10996 100 9e-19 >seq371 Length=13317 Score = 190 bits (210), Expect = 6e-46 Identities = 151/179 (84%), Gaps = 3/179 (2%) Strand=Plus/Minus Query 38 ATCAGTATTTATTGTCACTACCTCCCCG-TGTCGGGATTGGGTAATTTGCGCGCCTGCTG 96 ||||| |||||||||| | |||||| | | | | ||||||||||||| ||||||||||| Sbjct 4189 ATCAGGATTTATTGTCGCCACCTCCTCTCTATTGAGATTGGGTAATTTACGCGCCTGCTG 4130 Query 97 CCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCC 156 || || | ||||||| |||||||||||||| |||||||||||||||||||| ||||| Sbjct 4129 CCACCCGTAGATGTGGACGCCGTTTCTCAGGCGTCCTCTCCGGAATCGAACCCTGATTCC 4070 Query 157 CCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAG 215 |||||||||||| ||||||||| |||| || | ||||||| ||||||||||||||| Sbjct 4069 CCGTTACCCGTTACAACCATGGTAAGCCAATACCTTACCATC--AAGTTGATAGGGCAG 4013 Score = 102 bits (112), Expect = 2e-19 Identities = 87/106 (82%), Gaps = 1/106 (1%) Strand=Plus/Minus Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTA 458 || || | ||||| | ||||||||| | ||||| | ||| | | |||||||||| Sbjct 3820 TAGACAACAACTGTTGTAATGAGCCGTCTGCAGTCTAGTCGTACA-AGGACTTATACTTA 3762 Query 459 GACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 3761 GACATGCATGGCTTAATCCTTGAGACAAGCATATGACTACTGGCAG 3716 >seq4248 Length=221 Score = 183 bits (202), Expect = 9e-44 Identities = 122/136 (90%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 |||||||||||||||| ||||||| | ||||||| ||||||||||||||||||||||||| Sbjct 136 TATTTATTGTCACTACTTCCCCGTATTGGGATTGAGTAATTTGCGCGCCTGCTGCCTTCC 77 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 | || ||||||||| ||||||||||||||||||||||||||||||| |||| |||||| Sbjct 76 GTAGAAGTGGTAGCCATTTCTCAGGCTCCCTCTCCGGAATCGAACCCGGATTCTCCGTTA 17 Query 163 CCCGTTGATACCATGG 178 |||||| ||||||| Sbjct 16 CCCGTTACAACCATGG 1 >seq10996 Length=395 Score = 100 bits (110), Expect = 9e-19 Identities = 55/55 (100%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 450 TTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7 TTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 61 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510197878272