Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_031905.1 Length=42894 Score E Sequences producing significant alignments: (Bits) Value seq93 118 3e-22 >seq93 Length=584700 Score = 118 bits (130), Expect = 3e-22 Identities = 176/247 (71%), Gaps = 2/247 (1%) Strand=Plus/Plus Query 26636 aaaaaaaTGGACTTAATAGGAAAACTAATATTGATTGATGATGTAAAAGAAATTTCG-GC 26694 || || ||||| | ||||||||| ||| | || || || | | || || || | || Sbjct 432590 AAGAAGATGGAAGTTATAGGAAAAGTAAAAGTGGTTAATCCGG-AGCAGCAAGTTAGTGC 432648 Query 26695 ATCATTCaaaaaaaGAGACGTTGCAATTGAAACGGATGAACAATATCCGCAAAAAATATT 26754 ||||||||||||||||| | | | || || ||||| |||||||| ||| | || || Sbjct 432649 CTCATTCAAAAAAAGAGAACTAGTAGTTACTACAGATGAGCAATATCCACAACACATTTT 432708 Query 26755 GATAGAATTCACGCAAGACAAATGCGATTTATTAAATAATTACAAACTTGATGATGTTGT 26814 || ||||| || ||||| |||||||||||||| | | || |||| | || | || Sbjct 432709 AATCGAATTTACACAAGATAAATGCGATTTATTGAGCAGCTATAAACAAGGAGAGGCAGT 432768 Query 26815 AAAAATTGCAATCAACATCAACGGTCGTGAATGGATCAATCCGCAAGGCGaaaaaaaaTA 26874 |||| || | ||||| | | || | |||||| | ||||| ||||| |||| | ||| Sbjct 432769 AAAAGTTTCTATCAATTTAAGAGGAAGAGAATGGGTTAATCCACAAGGAGAAACTAGATA 432828 Query 26875 TTTCAAT 26881 ||||||| Sbjct 432829 TTTCAAT 432835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137117407038304