Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_031940.1 Length=77375 Score E Sequences producing significant alignments: (Bits) Value seq3933 87.8 9e-13 >seq3933 Length=4962 Score = 87.8 bits (96), Expect = 9e-13 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 65760 GTAGTTAGTGTTATCAGATATCACCAATAATTTATCGGGGATCATCTGCAGCCTTTTTAC 65819 |||| | |||||||||| || |||| || ||||| ||||| ||||| | ||||| Sbjct 1473 GTAGCTCTTGTTATCAGAGATAACCAGTAGCTTATCTTTCATCATTTGCAGGCGCTTTAC 1414 Query 65820 GTATATTTTATCATCAAAGCCAAAGACATAGATGCCATCACCATCGAACTGGTTGATGCT 65879 | | | || || | ||| ||||||| |||||||| ||||| || | | Sbjct 1413 ATGGGCTGTGTCGTCGTACAGAAACGCATAGATACCATCACCGTCGAAAGATTTAACCGT 1354 Query 65880 TATATCGACAAAAATAAGATCTCCCGGTTCAATTGTTGGCGCCATGCTGTCACCGCGCAC 65939 ||||| || || | ||||| || ||||| || ||| | |||||||||||||||||| Sbjct 1353 GATATCAACGAACAGCAGATCACCTGGTTCGATCGTTCCTGACATGCTGTCACCGCGCAC 1294 Query 65940 GTTAAT 65945 |||||| Sbjct 1293 GTTAAT 1288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247434838496272