Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20discoideum_20[refseq_20GCF_5F000004695.1_202009-08- 24] 41 sequences; 34,204,973 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq41 194 5e-47 >seq41 Length=55564 Score = 194 bits (214), Expect = 5e-47 Identities = 241/325 (74%), Gaps = 9/325 (3%) Strand=Plus/Plus Query 168 ATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGG 227 ||||| ||||||| ||||| |||||||||| | ||| |||| | ||||| Sbjct 25733 ATTAGGCAGTTGGTGGGGTAAAGGCTTACCAAACCTGAGATTCGTAGGTGGTTCGAGAGA 25792 Query 228 GTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGG 287 ||||| ||||||||| | ||| | | | |||||||| | | |||| ||||| || Sbjct 25793 ATGATCATCCACATTGGTATTGAAAGAACGACCAAACTCTGAAG--AGGCTGCAGTAAGG 25850 Query 288 AATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTC 347 ||||||| |||||| || |||| |||| |||| || | | ||||| || |||| | Sbjct 25851 AATATTGGACAATGAGCGCAAGCTTGATCCAGCTACACTGAGTGAGGGAAGAAG----TA 25906 Query 348 GGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGAAGCCCCGGC 407 | |||||| |||| | ||||||||||||||| | || | || |||| |||||| Sbjct 25907 AAG-CGTAAACCTCTTTTAATAAGGAAGATAATGACAAAAATTAAAGAAGAAGTCCCGGC 25965 Query 408 TAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGG 467 ||| | ||||||||| |||||||||||||| ||||||| ||| |||| || || | | | Sbjct 25966 TAATTTCGTGCCAGCCGCCGCGGTAATACGGAGGGGGCAAGCATTATTCGTAAGGA-TTG 26024 Query 468 GGCGTAAAGGGTGCGTAGG-TGGTT 491 ||||||||||||||||||| ||||| Sbjct 26025 GGCGTAAAGGGTGCGTAGGCTGGTT 26049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497599385984