Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20discoideum_20[refseq_20GCF_5F000004695.1_202009-08- 24] 41 sequences; 34,204,973 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq34 172 1e-40 >seq34 Length=39796 Score = 172 bits (190), Expect = 1e-40 Identities = 194/258 (75%), Gaps = 5/258 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||||| | || |||||| | |||||| |||||||||||||||||||| Sbjct 31799 CTTCTTAGAGGGACTACCTGCCTCAAGCAGGCGGAAGTCCGAGGCAATAACAGGTCTGTG 31858 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||| |||||||||||||||||||| || || ||| || | Sbjct 31859 ATGCCCTTAGATACCTTGGGCCGCACGCGCGCTACAATGTAGGAAACAAAAAG----GCT 31914 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| | |||||||| ||||||||| | | || || ||| ||| | || | ||| Sbjct 31915 CCTGGTCCGGAAGGATTGGGTAATCATTTGAATTTCCTACGTAACTGGGCTTGATCTTTG 31974 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| || | |||||||||| ||| ||||||| ||||| | | | ||| | Sbjct 31975 TAATTATTGATCATAAACGAGGAATTCCTTGTAAGCGTAAGTCATTACCTTATGCTGAAT 32034 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 32035 ATGTCCCTGCCCTTTGTA 32052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947199611648