Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20discoideum_20[refseq_20GCF_5F000004695.1_202009-08- 24] 41 sequences; 34,204,973 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq34 410 4e-112 seq41 91.5 5e-16 >seq34 Length=39796 Score = 410 bits (454), Expect = 4e-112 Identities = 268/295 (91%), Gaps = 0/295 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||| |||||||||||| | | |||| | ||| || |||||||||||||||||| Sbjct 36005 CTCCCACCTATTCTACACCTTTTAGGTCACTATGCAATATCAGACTAGAGTCAAGCTCAA 35946 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||||||||||||||||||||| || || | |||||||||| | || ||||||||||| Sbjct 35945 CAGGGTCTTCTTTCCCCGCTGTTTTTGCAAGGCCCGTTCCCCTTGCAGTGGTTTCGCTGT 35886 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct 35885 ATAGTAGTTAGGGACAGTGGGAATCTCATTGATCCATTCATGCGCGTCACTAATTAGATG 35826 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct 35825 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGTGCTAGG 35766 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531 |||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 35765 TTGAATCTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 35711 Score = 123 bits (136), Expect = 8e-26 Identities = 91/106 (86%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| |||||| ||||||||||||||| |||| | |||| |||||| |||||||| Sbjct 36301 CTTTTACTCTACGTGAGATTTCTGTTCTCACTGAGCCTGCCTTTGGACACTTGCGTTATC 36242 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGT 112 ||||||| ||||||||||||||||||||||||||||||| | ||| Sbjct 36241 TTTTAACAAATGTGCCGCCCCAGCCAAACTCCCCACCTGAAACTGT 36196 >seq41 Length=55564 Score = 91.5 bits (100), Expect = 5e-16 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 ||||||||| | |||||| ||||||||||||||| ||||| ||| ||| |||| Sbjct 20486 GACAGTGGGGAGGTCGTTACACCATTCATGCGCGTCGAAAATTACTCGACAAGGAATTTC 20427 Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTAC 466 ||||||||| || ||||||||||| ||||||||||| Sbjct 20426 GCTACCTTAGGACCGTCATAGTTACAGCCGCCGTTTAC 20389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635199329568