Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20discoideum_20[refseq_20GCF_5F000004695.1_202009-08- 24] 41 sequences; 34,204,973 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq4 131 2e-25 >seq4 Length=5450249 Score = 131 bits (144), Expect = 2e-25 Identities = 361/549 (66%), Gaps = 6/549 (1%) Strand=Plus/Minus Query 162291 TATTATTAAAACAGTTCAACCAGATGAAATATATAACCTAGGGGCTCAGAGTCACGTTAA 162350 |||| || || |||| | ||| |||||| ||||| |||| || || ||||| ||||| Sbjct 2062771 TATTGTTTCAAAAGTTAATCCAACTGAAATTTATAATTTAGGTGCACAAAGTCATGTTAA 2062712 Query 162351 GGTTTCATTTGATCAGCCTGAATACACAGCACAGACCGACGCATTGGGCACTCTAAGGGT 162410 |||||||||||| | | ||||| |||| | || | || || ||| | | Sbjct 2062711 AGTTTCATTTGATATGTCAGAATATACAGGTGATGTTGATGGTTTAGGTTGTCTTCGTTT 2062652 Query 162411 GCTAGAAGCCGTCCGTCTTCTTGGTATGGAATCATACGTAAGAATCTACCAAGCGAGCAC 162470 | || || | ||| | ||||||||| | | || | | || ||||| || Sbjct 2062651 ATTGGATGCAATTCGTAGTTGTGGTATGGAGAAAAAGGTTAAATATTATCAAGCTTCAAC 2062592 Query 162471 CAGTGAGCTTTATGGGCTAGTTCAGGAGACACCCCAGAAAGAAACCACTCCAATGTATCC 162530 | ||| | ||||| |||||| |||| || || ||| ||||| ||| | ||||| Sbjct 2062591 CTCTGAATTATATGGTAAAGTTCAAGAGATTCCACAATCAGAGACCACACCATTCTATCC 2062532 Query 162531 ACGATCCCCTTATGGAGTTGCTAAACTATATGGGTTCTGGATCATCAAAAACTACAGGGA 162590 ||| || || || | || || || | ||||| | |||||| | |||||| | || Sbjct 2062531 ACGTTCACCATACGCTGTCGCAAAGCAATATGCCTATTGGATCGTTGTAAACTATCGTGA 2062472 Query 162591 AAGCTATGACATACATGCCTCTAGCGGTATTCTATTCAATCACGAAAGCTCACGCAGAGG 162650 || || || |||| | || ||||| |||||||||| ||| |||| ||||| Sbjct 2062471 GGCTTACGATATGTATGCATGTAATGGTATCTTATTCAATCATGAATCACCACGTAGAGG 2062412 Query 162651 AGAGACGTTCGTCACACGCAAGATCGTCCGAGCCTTGTCCCGAATTAG-TGTGG--GACT 162707 || || || || | |||||| || | | | | ||| ||||| || Sbjct 2062411 TCCAACTTTTGTAACTAGAAAGATCACTCGTTTCGTTGCTGGTATTGCATGTGGTAGAGA 2062352 Query 162708 CCAAAGTGATCTACAACTTGGAAACCTCAATGCCCGACGTGACTGGGGACACGCCAAAGA 162767 ||| | ||||| | || || |||| || |||||| ||||| ||||| | ||| Sbjct 2062351 TGAAATTC-TCTACT--TGGGTAATATCAACGCTAAACGTGATTGGGGTCACGCTAGAGA 2062295 Query 162768 CTACGTAGAGGCTATGTGGTTGATGCTTCAGCAAGAGAAGCCAGATGATTATGTGATCGC 162827 ||||| || || |||||||| ||| | || |||||||||||||| |||| || || || Sbjct 2062294 TTACGTTGAAGCAATGTGGTTAATGTTACAACAAGAGAAGCCAGAAGATTTCGTTATTGC 2062235 Query 162828 AACTGGTGA 162836 |||||||| Sbjct 2062234 CACTGGTGA 2062226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691458845627160