Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq21 206 9e-51 >seq21 Length=1919465 Score = 206 bits (228), Expect = 9e-51 Identities = 143/162 (88%), Gaps = 5/162 (3%) Strand=Plus/Plus Query 276 TCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTC 335 || |||||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct 1207051 TCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTATTGATGCCAAGCCCGTTC 1207110 Query 336 CCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTC 395 ||||||||||||||||||| || |||| |||||||||||||||| || || |||||||| Sbjct 1207111 CCTTGGCTGTGGTTTCGCTGTATGGTAGTTAGGGACAGTGGGAATGTCATTTATCCATTC 1207170 Query 396 ATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTA 437 ||||||| |||||||||||||||||||||||||| ||| Sbjct 1207171 ATGCGCG-----AATTAGATGACGAGGCATTTGGCTACGTTA 1207207 Score = 134 bits (148), Expect = 5e-29 Identities = 80/84 (95%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 438 AGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACA 497 |||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||| Sbjct 1207594 AGAGAGTCATAGTTACTCCCGCCGTTTACCCGTGCTAGGTTGAATCTCTTCACTTTGACA 1207653 Query 498 TTCAGAGCACTGGGCAGAAATCAC 521 ||||||||||||||||| |||||| Sbjct 1207654 TTCAGAGCACTGGGCAGGAATCAC 1207677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635199591200