Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3 307 8e-79 seq5 127 2e-24 >seq3 Length=2750715 Score = 307 bits (340), Expect = 8e-79 Identities = 1209/1872 (65%), Gaps = 57/1872 (3%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 |||||| ||||| ||||| || | ||||| || || | || |||||||| || || Sbjct 2512074 ATCGACGGTGAATTGGATGGCGTCGGCAGCGGCACGAGTACGGAGGTAGTACATACCAGT 2512133 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTC 65196 |||||| || ||| || ||||||||||| || | | ||| ||| | || || || Sbjct 2512134 CTTGAGACCCTTCTTCCAGGCGTAGAAATGCATAGAGGTGAGTTTGGCAAAGTTTGGTTC 2512193 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 ||| | | || || ||||||||||| || ||||| | ||| | || |||||||| Sbjct 2512194 GGCAATAAACACGTTGAACGACTGACTTTGGTCGATAAAGGCACCTCTGTCGGCAGCCAT 2512253 Query 65257 GTCAATGATACGACGTCC-CGATATCTCCCAGACGGTCTTGTACAGGC----GACGTACC 65311 ||||||| |||| ||| |||||||| | | ||||||||| || || | Sbjct 2512254 ATCAATGAGTGTACGTTGACGA-ATCTCCCAAGCCGACTTGTACAGCTCTTTGAGGT-CG 2512311 Query 65312 TCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGC 65371 || || || | | | || || || || ||||| ||||| || | || | Sbjct 2512312 TCG---GGGATACCTTGGACGTTTTGTACCGACCCACGGTTAGCAATGATTTGGTTCTTC 2512368 Query 65372 ATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACT 65431 || | ||||||||| | | || |||| || | ||| || |||| ||| Sbjct 2512369 ATTTCGGGAGTCCACAAACCAAGTGCCATGAGATCCTGGAGCAATTGCTTGTTGACGACG 2512428 Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491 |||||||||| || || || || |||||| ||| |||||||| | Sbjct 2512429 GTAAACTCGCCGGCCAAGACCTTGCGCGAGTAAATGTTGCTAGTGTATGGTTCAAAACAC 2512488 Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551 ||| ||||||| ||||| || | || ||||| ||||||||||| ||||| | ||| ||| Sbjct 2512489 TCATTGTTGCCGAGAATCTGTGAGGTGGATGCTGTTGGCATGGGTGCGACGAGCAACGAG 2512548 Query 65552 TTTCGCAATCCGTTCATTTCAAT--GTTGTGACGCAATTCGTCCCAGTTCCACATCGGTT 65609 || || | |||| | | || ||||| | || |||||| ||| | || Sbjct 2512549 TTACGTAGACCGTGTTTGACGATACGTTGTTTGAGAG--CGGCCCAGTCCCA-ACGGGCA 2512605 Query 65610 TATCGTCG-ACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAA 65668 || || | |||||| ||||| || ||| ||| | || || || ||| Sbjct 2512606 GATGGTTGGACATCC------CACATGTCAAATTGTAGGATACCTTGGGAAGCGGGCGAA 2512659 Query 65669 CCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCG 65728 || || | ||||| || || || ||| | |||||| | || || | Sbjct 2512660 CCTGCAAAGGTCTCGTATGGACCGTCGCGCTCGGCCAATTGACACGATGCGTCAAGGGAA 2512719 Query 65729 GCAAAATAAATGGTCTCGAAAATG-CGTCGATTAAGTTCACGTGCCTCATC-GCTC--TC 65784 ||| | || ||||| ||| ||| | | | | | | ||| || || | | | || Sbjct 2512720 GCATAGTAGATGGTTTCGGCAATCTCCTTGTTGAGG---ACG-GCGGCAGCTGGTGAGTC 2512775 Query 65785 GTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGG 65844 | ||||||| | || ||| |||||||| |||||||| |||||| ||| | || Sbjct 2512776 AAATGGCATACGGAGAGCGATAAAGACGTCGGCCAAACCTTGAATTCCAATGCCGGTTGG 2512835 Query 65845 ACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAAT 65904 ||||||||||| |||||||| | || || || |||||| |||| || || || Sbjct 2512836 ACGATGACGCATGTTGGAACGACGAGCTTCTTCGACTGGGTAGAAATTACGGTCAATGAT 2512895 Query 65905 GCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCAAA-- 65961 || | || ||||| | | | | ||| || || || ||| ||||| Sbjct 2512896 CTTGTTGAGGTTACGTGTAATGATACGGGTGATTTCGGCGAGATGGTTATGG-TCAAATG 2512954 Query 65962 ATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAG 66021 | | || |||| | || || | |||||||| || || |||| ||||| || Sbjct 2512955 AAGCGACGGCCGATGGCGAACTACG--CTTGACAAACTTTGGTAGAGCAATCGATGCAAG 2513012 Query 66022 GTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACT 66081 |||||| || |||| ||||| | | || |||| || ||| ||||| || ||||| Sbjct 2513013 GTTGCAAACGGCTACTTCGTCGGCTGAAGTGTACTGGATAATCTCGGTACAGAGATTGGA 2513072 Query 66082 GCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACAT 66141 ||| | || ||||| | |||| ||| || ||| |||||| || |||||||| | Sbjct 2513073 GCATTGAATAGTGCCAAGGTTCTTTTGGTTGGACTTTTCATTGCAAGCGTCCTTGTAGAG 2513132 Query 66142 CATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGC 66201 ||||| || || || ||||| | ||| || || |||||||| ||| || | |||| Sbjct 2513133 GATGTATGGGGTACCAGTCTCGATTTGCGAGTCGATGATGGCAAACCAGAGGTCTTGTGC 2513192 Query 66202 CTTCACCGTACGTACCGCCCTA--CC-----TTTGCGTTCGTAATGTTCGTAGAGGTGTT 66254 ||| ||| || | || ||| || | ||| ||||| |||||| | Sbjct 2513193 CTTGACC--ACCTTACGGGCTAATCCAGGAGTCTGC--TCGTAGGAAAGGTAGAGATCGC 2513248 Query 66255 CGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACC 66314 ||| || || | |||| || | ||| | || |||||| | || ||||| Sbjct 2513249 GGAACTTGTCGCCGTAGCAATCGGCCAATCCAGGAGCTTCGTTTGGACAAAACAACGACC 2513308 Query 66315 AATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGA 66374 | || ||| |||||| ||||| |||||| ||||| | || |||||| ||||| |||| Sbjct 2513309 ACTCGGCATTCTGTTCGACACGTTCCATAAAGAGATCGGATACCCAGAGTGCGTAAAAGA 2513368 Query 66375 GATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGA 66434 | || || || || ||| || | ||||| || || | |||||| ||||| || | Sbjct 2513369 GGTCACGGGCACGCATCTCTTCTTTACCGTGGTTCTTTTTAAGGTCGAGAAACTCGAAAA 2513428 Query 66435 TGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTT 66494 |||| | ||||||||||| ||||||| || |||| ||| | | ||||| ||||||| Sbjct 2513429 TGTCCGAGTGCCATGGTTCGAGGTAGACAGCAAACGCACCCTTTCTCTTGCCTCCACCTT 2513488 Query 66495 GGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATT 66554 ||||||| || || || || ||| || ||||| | ||| || || | ||||| Sbjct 2513489 GGTCGACATAACGGGCAGTATCGTTAAACACACGTAGCATTGGCACCAAACCGTTGCTAG 2513548 Query 66555 TGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAA 66614 | || ||||| || ||| ||||| | || || || | ||| || | ||||| Sbjct 2513549 TACCGTTGGTTCCACGGATATAGGATCGTGCGGCACGGATCTTGTGCACGGCGATACCAA 2513608 Query 66615 TACCACCGGCCGTCTTCGAGATGGCAGCACAAT--CGGCCACTGTCCGGAATATGCCGTC 66672 |||||||||| |||| || ||| ||||| | | |||| |||| || || Sbjct 2513609 TACCACCGGCACTCTTGGAAATGAGGGCACATTGCTTGAGCGTGTCATAAATA--CCTTC 2513666 Query 66673 AATGGAGTCACCCTTGATGGTCAGGAGGTAGCA--TGAACTAAGTTGGGGTTTGGGTGTG 66730 || ||||| |||| || || |||| | || | || | ||| || | ||| Sbjct 2513667 GATCGAGTCGTCCTTCATCTGCACGAGGAAACAACTCGAC--ATTTGAGGCGAGTTGGTG 2513724 Query 66731 GCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTAC 66790 | || |||||||| || || || |||||||||||| || |||| | | |||| Sbjct 2513725 CCAGCGTTAAAGAGGGTTGGGGTGGCATGCGTAAAGTAACGGTTTGACAATTGGTCGTAC 2513784 Query 66791 GTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAG 66849 || || ||| |||| ||||||| || || || || || |||| ||| ||||||| | Sbjct 2513785 GTGTCAATGGCAGCGTCAATGTCGTCACCGTGGATACCAAGTGAGACA-CGCATCAACAA 2513843 Query 66850 GTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGT 66909 || ||| || ||||||| | | ||| |||| | | || ||||| ||||| || || Sbjct 2513844 GTGTTGGGGACGTTCGATGATCATATCATTGACACGGTGCAAATAGGAACGTTCGAGTGT 2513903 Query 66910 CTTGATACCAAA 66921 ||||| ||| || Sbjct 2513904 CTTGAAACCGAA 2513915 >seq5 Length=4166812 Score = 127 bits (140), Expect = 2e-24 Identities = 354/524 (68%), Gaps = 22/524 (4%) Strand=Plus/Plus Query 61395 ATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAA 61454 ||| || ||||| || || || || || || ||| ||||| || ||||| || | Sbjct 871613 ATTATTTAATGCAATTGAAACTATTCCATGTGTAAAGAAAAAAGCTGACTGGGCTTTGAG 871672 Query 61455 TTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGA 61514 ||||| |||| | | | | |||| ||||| ||| | || ||||| | || || Sbjct 871673 ATGGATTACCAACTCCAAGTCG---TTTGCCGAACGTTTGGTAGCTTTTGCCGCCGTTGA 871729 Query 61515 GGGTGTATTTTTCAGTGGATCGTTTGCCG--CAATCTTTTGGTTGAAGAAACGTGGACTT 61572 ||| | ||||||||||| | |||| | | | ||||||||| | ||||| ||||| || Sbjct 871730 AGGTATCTTTTTCAGTGG-TAGTTT-CTGTTCGATCTTTTGGCTCAAGAAGCGTGGTCTC 871787 Query 61573 ATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGAT 61632 ||||| ||||| ||||| ||| |||||||| || ||||| || | ||||| || Sbjct 871788 ATGCCAGGTCTCACCTTTTCCAACGAGTTGATCAGTCGTGACGAAGGTCTCCATTGCGAC 871847 Query 61633 TTTG-CTGTTTTGCTATTCAAACGCTATCTGGTGAAT-CGTCCGTCG-GAGGAGCGTGTG 61689 |||| |||| || || | || | | || ||| | || || | || | | Sbjct 871848 TTTGCCTGTCTT-CTCTATAA---CAAGCTCAACAATAAGCTCGACGTCAAGACC--ATC 871901 Query 61690 GGTGAGATTGTTCGTGAGGCGGT-AACTATCGAACAGGAATTTCTGACTGACGCTTTGCC 61748 | || ||||||| || || | | | ||| |||||||| | |||||| | ||||| Sbjct 871902 GAATCCATCATTCGTGACGCCGTCGAATGT-GAAAAGGAATTTGTCACTGACTCGTTGCC 871960 Query 61749 CGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGA 61808 |||| ||||| |||||||| || | |||||| | || |||||||| |||||| Sbjct 871961 CGTCGATCTCATTGGCATGAACAGTCGTGAAATGTCCAAATACATTGAATTCTGTGCCGA 872020 Query 61809 CCGTCTGTTGGTC-GATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATT 61867 ||||| | ||| |||| || ||| ||||| ||| | || |||||||||| Sbjct 872021 TCGTCTCCTCGTCTCGCTTGGCTA-CAAGAAAATCTACAATTCTGCCAATCCATTTGATT 872079 Query 61868 TCATGGACATGATTTCGCTGGATG-GCAAGACGAATTTTTTCGA 61910 ||||| |||||||| || ||| | ||| | || |||||||| Sbjct 872080 GGATGGAAATGATTTCACT-CATGCGAAAGGCAAACTTTTTCGA 872122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567878866000