Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20firmibasis_20[genbank_20GCA_5F000277485.1_202012-07- 10] 997 sequences; 30,559,666 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq57 237 1e-57 >seq57 Length=183543 Score = 237 bits (262), Expect = 1e-57 Identities = 985/1528 (64%), Gaps = 67/1528 (4%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || || ||||| || || |||| ||||| | || | |||||||||||| || ||| Sbjct 134211 TCAACAGTGAATTGAATTGCATCGGCAGCTGGACGAGTACGAAGATAGTACATACCAGTC 134270 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 || | || ||||| ||||||||||| || | | ||||||| | | || || Sbjct 134271 TTTAAACCCTTCTTCCAAGAGTAGAAATGCATTGAAGTGAGTTTTGCAAAGGTTGGTTCA 134330 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATG 65257 || | | ||| || ||||| ||||||||| || ||||||||| |||||||| Sbjct 134331 GCGATGAAAACATTGAAACTTTGACTTTGATCGATGAAAGCACCACGATCAGCAGCCATA 134390 Query 65258 TCAATGATACGAC-GTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAAT 65316 ||||||| | | | ||| || ||||| ||||| ||||| || | ||| Sbjct 134391 TCAATGAGAGTTCTTTGACGA-ATTTCCCATACGGTTTTGTAGAGTTCTTTCAATTCATC 134449 Query 65317 TGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCGA 65376 |||||| | |||| |||| ||||||||| || || || |||| |||| Sbjct 134450 TGGAATACCACCAATCGATTGGATTGAACCACGTGCAGCGATGATTTGATTCTTCATCTC 134509 Query 65377 CTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGAC--TTG- 65433 || ||| | ||||| || || |||| | | ||| | | ||| |||| ||| Sbjct 134510 TGGTGTCCAAATGCCCAACTCCATGAGATCCTCCAACAATT---GTTTGTTGACAATTGT 134566 Query 65434 GAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTC 65493 ||| || || | || |||||||| || ||||| || ||| ||||||||| |||| Sbjct 134567 GAATTCACCAGCCAAGACACGACGACTGTAAATGTTTGAAGTGTATGGTTCAAAGCATTC 134626 Query 65494 AGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTT 65553 | | || || || ||||| ||| || || |||||||| || |||| ||| | ||| || Sbjct 134627 ATTATTACCAAGGATTTGACTAGTTGAAGCGGTTGGCATTGGTGCGATCAATAGTGAATT 134686 Query 65554 TCGCAATC--CGTTCATT-TCAATGTTGTGACGCAATTCGTCCCAGTTCC-ACATCGGTT 65609 || | | | || ||| | || || | ||||||||||| |||| || | | Sbjct 134687 ACGTAGACCACCTTTATTGACGATCTTATCCTTTAATTCGTCCCAATTCCAACGTGAACT 134746 Query 65610 TATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAAC 65669 | || |||| ||||||||| ||| || | || | || || |||| Sbjct 134747 TGGTGT-AACAT------TCCACATATCAAATTGGAGAATACCTTTGGATGCTGGGGAAC 134799 Query 65670 CGAGGAAACTATCGTACACTCCCTC-CTCCTTGGCAAGT--TGA-CAGCTGGTCTCGAGT 65725 | ||||||| || || || || | || || | ||| ||||| | | Sbjct 134800 CTTGGAAACTCTCATATGTGCCATCACGTACTGCTAATTCATGAGAAGCTGTT----AAA 134855 Query 65726 GCGGCAAAATAAATGGTCTC-GAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTC 65784 ||||| ||||||||||| || | | | | | ||| | || | ||| || | || || Sbjct 134856 GCGGCGAAATAAATGGTTTCAGCGATTTCAAC-ATTCAATTTAGATGCAGCAACACTATC 134914 Query 65785 GTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGG 65844 | | ||||||| ||| | | ||| ||||||| |||||||| ||||||||||| || Sbjct 134915 GAATGGCATACGCATTTGAATGAAAACATCGGCCAAACCTTGAATACCAATACCGATTGG 134974 Query 65845 ACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAAT 65904 |||||| | | ||| ||| | | ||||| ||||| || | || ||||||||| Sbjct 134975 ACGATGTCTGAGATTCGAAGTTTTTGCCTCTACAACAGGATAAAAGTTACGATCGATAAT 135034 Query 65905 GCGATTCAAATTGCGTGTCA-CCACATGCACGATACGTC-----GCAAT---TGTTCGAA 65955 || | ||| || | | || || | || || | ||| || ||||| Sbjct 135035 AACGTTGAGATTTACAGTGATCAACTTG---GTTATCTCAAAGAGGAATTGATGATCGAA 135091 Query 65956 ATCAAAATGTTTAGGACGATCGGGAGTGCCGG-----ACAC-CACAAACTTGGGAAGGGC 66009 || | ||| | |||| | | ||| | || | || || ||||| || Sbjct 135092 TTCCTTCTCTTTTG---GATCTGTGGAGCCTGGTTTTTGACGAATGAATTTTGGAAGTGC 135148 Query 66010 AAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGT 66069 || ||| || || || || ||||| || || ||||| | || || | | || || || Sbjct 135149 AATAGAGGCAAGATTACATACAGCAATTTCATCAGGTGATGTGTATTGAATGATCTCAGT 135208 Query 66070 GCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGC 66129 || |||||||||| | ||||| || | ||||| |||||| || |||||| || Sbjct 135209 ACAAAGATTACTGCTACTGATGGTACCGAGATTCTTTTGATTGGATTTAGCATTGCAAGC 135268 Query 66130 ATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCA 66189 |||||| |||| ||| | || || || || |||||||| ||||| || || || ||| Sbjct 135269 ATCCTTATACAATATGAATGGTGTACCAGTTTCAACTTGTGACTCCATAATTGCAAACCA 135328 Query 66190 AAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCT----TTGCGTTCGTAATGTTCGT 66245 ||| | ||||||| | |||| | | || |||| ||| || | | || Sbjct 135329 AAGTTCTTGTGCCTTAATTACACGTCTTGGAAGATCTGGTGTTGC-TTCATATTTTAAGT 135387 Query 66246 AGAGGTGTTCGAAGGATTCACCCCATACT-----TCGGACAGACATGGACACTTGTGTGG 66300 ||||| | | ||| | || || | | || || |||| ||| || | ||| Sbjct 135388 AGAGG-----GCACGATGCTCCTCAGAGTGAGTCTCAGAGAGACCTGGTGCCTCATTTGG 135442 Query 66301 ACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCA 66360 ||| | || | ||||||||||| ||||| ||||| |||||| | |||| | ||| Sbjct 135443 ACAAAAGAGTGCCCAATCACCATTTTGTTCAACACGTTCCATAAAGATATCACTGACCCA 135502 Query 66361 GAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGT 66419 ||| ||||||||||| || | ||||| ||| || | || ||| ||||| | | Sbjct 135503 GAGAGCGTAGAAGAGGTCTCTTGCTCTCATCTCTTCTTTACCAGTG-TTTTTCTTGAGAT 135561 Query 66420 CGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATAC 66479 | | |||||||| | |||||||||||||| || | ||||| ||| || | || | | Sbjct 135562 CAATAAACTCAAATACATCGGCATGCCATGGCTCTAAGTAGACGGCAAAGGCACCTTTTC 135621 Query 66480 GTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTA 66539 || || ||||||||||| || || || || || ||||| ||||| | ||| |||| Sbjct 135622 TCTTACCACCACCTTGGTCAACATAACGTGCAGTATCATTGAAAACACGAAGCATTGGTA 135681 Query 66540 CGAGCCCGTTAGATTTGCCATTGGTGCC 66567 | | ||||| | |||||||| || Sbjct 135682 CCAAACCGTTGCTAGTACCATTGGTACC 135709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397563169176080