Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20intermedium_20[genbank_20GCA_5F000277465.1_202012- 07-10] 3,111 sequences; 30,529,520 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq816 105 2e-20 >seq816 Length=9727 Score = 105 bits (116), Expect = 2e-20 Identities = 229/335 (68%), Gaps = 6/335 (2%) Strand=Plus/Plus Query 156 ACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAAC 215 ||||||| ||||||| ||||||||| ||||| ||||| || |||| | |||| Sbjct 6779 ACAGGTGTTGCATGGCTGTCGTCAGTTCGTGCTGTGAGGCGTAACATTAATTTGTACAAC 6838 Query 216 GAGCGCAACCCTTAAGCTTAGTTGCCATCATTAAGTTGGGCACTCTA-AGTTGACTGCCG 274 || || || ||||||| | | || | | || || | | | | | | || || || | Sbjct 6839 GAACGAAATCCTTAAGTTCAATTACGA-CAGAAA-TGGAGAAATGAACAGAAGAGTGT-G 6895 Query 275 GTGACAAAC-CGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGG 333 | | | | | ||||| || ||| || ||||| ||| ||| ||||||| ||| Sbjct 6896 ATTTCTATCACATTGGAAGTTGAGGAAGATGTCAAGTCAGTATGGCCCTTATAGGAGGGG 6955 Query 334 CTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATC 393 || | | || |||||||| |||||| || ||||||| | || | |||||| | Sbjct 6956 CTTGAAATGTAATACAATGGTTCCTACAAAAGGAAGCGAAAGTGTAAGCTGGAGCAAAAC 7015 Query 394 CCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATC 453 | | |||| | || |||| ||||| |||||||||||| ||||| ||||| Sbjct 7016 CTAAAAAGGAAT-CTTAGTTTGGATTTATTTCTGCAACTCGAAATAATGAAAGCGGAATT 7074 Query 454 GCTAGTAATCGTAGATCAGCATGCTACGGTGAATA 488 |||||||||||||||||| | ||| ||||||||| Sbjct 7075 GCTAGTAATCGTAGATCATAAGGCTCCGGTGAATA 7109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503953210560