Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20intermedium_20[genbank_20GCA_5F000277465.1_202012- 07-10] 3,111 sequences; 30,529,520 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq2639 78.8 1e-12 >seq2639 Length=2904 Score = 78.8 bits (86), Expect = 1e-12 Identities = 101/142 (71%), Gaps = 6/142 (4%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAAT---CGGCATCTTCACCGATACTACAATTTCACT 81 |||||||| |||| | || | |||| | |||||||||| || | | |||||||| | Sbjct 246 GGGTCTTTCCGTC---TAGCTGCTAATATTCCGCATCTTCACGGAAAGTTCAATTTCATT 302 Query 82 GAGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACC 141 || | | | ||||||| |||||||||| ||| |||| || |||| Sbjct 303 GAAGTGATTCTGGAGACAGTGGGAAGGTCGTTACACCATTCATGCGCGTCGAAAATTACT 362 Query 142 CGACAAGGAATTTCGCTACCTT 163 |||||||||||||||||||||| Sbjct 363 CGACAAGGAATTTCGCTACCTT 384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547183508589