Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20intermedium_20[genbank_20GCA_5F000277465.1_202012- 07-10] 3,111 sequences; 30,529,520 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq816 123 5e-26 >seq816 Length=9727 Score = 123 bits (136), Expect = 5e-26 Identities = 127/165 (77%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 41 GCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCT 100 ||||||||| |||||||| |||||||||||||||| ||||| |||| | | |||| | Sbjct 6144 GCTGGATCAAGCTTTCGCTCATTGTCCAATATTCCTTACTGCAGCCT--CTTCAGAGTTT 6087 Query 101 GGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGC 160 || | | | ||| | ||| |||| ||||||| ||||| |||| |||| ||| | Sbjct 6086 GGTCTTTCTTTCAATACCAATGTGGATGATCATTCTCTCGAACCACCTACGAATCTCTGG 6027 Query 161 CTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGACCTAGGCT 205 |||||| |||| ||||| ||||||||| ||||| |||| || ||| Sbjct 6026 CTTGGTAAGCCTTTACCCCACCAACTACCTAATTCGACATACGCT 5982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071966650080