Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20intermedium_20[genbank_20GCA_5F000277465.1_202012- 07-10] 3,111 sequences; 30,529,520 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq816 93.3 9e-17 >seq816 Length=9727 Score = 93.3 bits (102), Expect = 9e-17 Identities = 154/215 (72%), Gaps = 12/215 (6%) Strand=Plus/Minus Query 67 TTTTATTCCCTTAT-AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTT 125 |||| |||| |||| |||||| |||||| | || |||| ||| |||| | | Sbjct 6198 TTTTCTTCC-TTATCAAAAGAGGTTTACGCTT--TA----CTTCTTCCCTCACTCAGTGT 6146 Query 126 GGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTT 185 ||||| ||| || ||| ||||| ||||||||||| ||||| |||| | | ||||| Sbjct 6145 AGCTGGATCAAGCTTTCGCTCATTGTCCAATATTCCTTACTGCAGCCT--CTTCAGAGTT 6088 Query 186 TGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACC-CCTATCCATCGTA 244 ||| | | | ||| | ||||||||| || | | ||||| ||||| |||| ||| Sbjct 6087 TGGTCTTTCTTTCAATACCAATGTGGATGATCATTCTCTC-GAACCACCTACGAATCTCT 6029 Query 245 GGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 |||| ||| ||| ||||||| || |||||||||| Sbjct 6028 GGCTTGGTAAGCCTTTACCCCACCAACTACCTAAT 5994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068766749632