Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq36 102 6e-17 seq33 89.7 4e-13 >seq36 Length=2033623 Score = 102 bits (112), Expect = 6e-17 Identities = 177/254 (70%), Gaps = 10/254 (4%) Strand=Plus/Plus Query 61395 ATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAA 61454 ||| |||||||| || || || || || ||||| ||| || || |||||||| | Sbjct 729878 ATTATTCAATGCTATAGAAACTATTCCATGTGTGAAAAAGAAGGCAGAATGGGCCTTGAG 729937 Query 61455 TTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGA 61514 ||||||| || | | ||||| || ||||| |||||||||| | || || Sbjct 729938 ATGGATCAATTCTAGATC------ATTTGCAGAGAGATTGGTGGCATTTGCAGCTGTTGA 729991 Query 61515 GGGTGTATTTTTCAGTGGATCGTTTGCCG--CAATCTTTTGGTTGAAGAAACGTGGACTT 61572 ||| | ||||||||||| | |||| | | | ||||||||| | |||||| | || | Sbjct 729992 AGGTATCTTTTTCAGTGG-TAGTTT-CTGTTCCATCTTTTGGCTAAAGAAAAGAGGTTTA 730049 Query 61573 ATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGAT 61632 ||||| ||| |||| ||| |||||| ||||| || || || || | |||||| | Sbjct 730050 ATGCCAGGTTTGACATTCTCCAATGAATTGATTAGTCGTGATGAAGGTCTACATTGTAAC 730109 Query 61633 TTTGCTGTTTTGCT 61646 |||||| |||||| Sbjct 730110 TTTGCTTGTTTGCT 730123 Score = 86.0 bits (94), Expect = 5e-12 Identities = 177/260 (68%), Gaps = 9/260 (3%) Strand=Plus/Plus Query 61096 ATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGAC 61155 ||||| ||| | || ||||| || |||||||| | || ||| | ||||| ||| || Sbjct 729514 ATGTATAAACAAGCAGAAGCCTCATTCTGGACAGCAGAAGAGATTGATTTAGCCAGTGAT 729573 Query 61156 ATGAATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTT 61211 || ||||| ||||| ||| | || |||| ||||||||||| |||| || Sbjct 729574 ATCAATGAATGGGAAAATAAGTTAAATGAAAA-TGAAAAACATTTCATTTCCAATGTATT 729632 Query 61212 GGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC--GTTTCGCG 61269 || || ||||| ||||| || ||||| || ||||| ||| || | ||| || | Sbjct 729633 AGCATTTTTTGCAGCTTCAGATGGTATTGTTAATGAAAATCTA--GCAACTAAATTTATG 729690 Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 || || ||| | | || || | |||||||| || ||||| |||||||| || ||| Sbjct 729691 AGTGAAGTTCAAATACCAGAAGCCAGATGTTTCTATGGTTTCCAAATTGCCATTGAAAAT 729750 Query 61330 GTCCACTCGGAGATGTACAG 61349 | || || || | ||||| Sbjct 729751 ATTCATTCTGAAACTTACAG 729770 >seq33 Length=884058 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 66332 ACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGC 66391 ||||| |||||| |||||| ||||| ||||| ||||| | || || || || | Sbjct 110875 ACACGTTCCATAAAGAGATCACAAATCCAAAGGGCATAGAATAAGTCACGAGCACGAATC 110816 Query 66392 TCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGT 66451 || || | || |||||||| | || | ||||||||||| || || |||||||| Sbjct 110815 TCTTCCTTACCATGATTTTTCTTTAGATCCAAGAACTCAAAGACATCAGCGTGCCATGGC 110756 Query 66452 TCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCG 66511 || | ||| | || || | || | | || ||||| |||||||| || || ||||| Sbjct 110755 TCTAAGTATACTGCAAAAGCACCTTTTCTCTTACCGCCTCCTTGGTCTACATAACGAGCA 110696 Query 66512 ACATTGTTGAAGACACGCAACATCGGTAC 66540 | ||| || ||||| ||||| ||||| Sbjct 110695 GTGTCGTTAAATACACGTAACATTGGTAC 110667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567738350560