Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq46 122 1e-22 >seq46 Length=277422 Score = 122 bits (134), Expect = 1e-22 Identities = 346/527 (66%), Gaps = 10/527 (2%) Strand=Plus/Plus Query 162315 TGAAATATATAACCTAGGGGCTCAGAGTCACGTTAAGGTTTCATTTGATCAGCCTGAATA 162374 ||| || ||||| || || || ||| ||| ||||| || |||||| | |||||| Sbjct 47936 TGAGATTTATAATCTCGGAGCACAGTCTCATGTTAAAGTCAGTTTTGATATGAGTGAATA 47995 Query 162375 CACAGCACAGACCGACGCATTGGGCACTCTAAGGGTGCTAGAAGCCGTCCGTCTTCTTGG 162434 |||||| | |||| | || | || | | || || ||| | ||| ||| Sbjct 47996 CACAGCCAATGTAGACGGTCTTGGTTGTTTACGTATTCTCGATGCCATTCGTTCATGTGG 48055 Query 162435 TATGGAATCATACGTAAGAATCTACCAAGCGAGCACCAGTGAGCTTTATGGGCTAGTTCA 162494 | | ||| | || | | |||| ||||| ||| || || ||||| || || Sbjct 48056 TTTAGAAGATAAAGTTAAATTCTATCAAGCCTCTACCTCAGAACTCTATGGAAAGGTACA 48115 Query 162495 GGAGACACCCCAGAAAGAAACCACTCCAATGTATCCACGATCCCCTTATGGAGTTGCTAA 162554 |||| || || |||||||| || | || ||||| ||||| |||| |||||| || Sbjct 48116 AGAGATTCCTCAATCTGAAACCACACCTTTTTACCCACGTTCCCCCTATGCAGTTGCCAA 48175 Query 162555 ACTATATGGGTTCTGGATCATCAAAAACTACAGGGAAAGCTATGACATACATGCCTCTAG 162614 || || || | ||||| | ||||||||| || ||| |||| | || | || Sbjct 48176 ACAATTTGCCTATTGGATTGTTGTAAACTACAGAGAGGCTTATAACATGTACGCATGTAA 48235 Query 162615 CGGTATTCTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGAT 162674 |||||| ||||||| ||||| || | ||||| || || || || | || || Sbjct 48236 CGGTATATTATTCAACCACGAGTCACCAAGAAGAGGTCCAACCTTTGTAACTAGAAAAAT 48295 Query 162675 CGTCCGAGCCTTGTCCCGAATTAGTGTGGGACT----CCAAAGTGA-TCTACAACTTGGA 162729 | | || |||| | || ||| || ||| | |||| | ||| | | || Sbjct 48296 CA--CTAGATTTGTTGCTAA--AGT-TGCTACTGGTTCTAAAGATACTCTCTATTTGGGT 48350 Query 162730 AACCTCAATGCCCGACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTGGTTG 162789 ||| ||||||| | |||||| ||||| || || | |||||| |||||||| |||||||| Sbjct 48351 AACATCAATGCACAACGTGATTGGGGTCATGCTAGAGACTATGTAGAGGCAATGTGGTTA 48410 Query 162790 ATGCTTCAGCAAGAGAAGCCAGATGATTATGTGATCGCAACTGGTGA 162836 ||| | || ||||| || ||| | || | ||| || ||||||||||| Sbjct 48411 ATGTTACAACAAGAAAAACCACAAGACTTTGTCATTGCAACTGGTGA 48457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691458733265040