Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01-
02] 14,005 sequences; 62,220,117 total letters
Query= AAMG01000056.1
Length=332
Score E
Sequences producing significant alignments: (Bits) Value
seq1400 132 9e-29
seq3 73.4 8e-11
>seq1400
Length=5517
Score = 132 bits (146), Expect = 9e-29
Identities = 150/197 (76%), Gaps = 3/197 (2%)
Strand=Plus/Minus
Query 129 CTACACTCTTTAACCGGCTATTCCGTCAGCCGGCGGCGTTGTCACTCCTGCGTCCCCACG 188
||||| ||||||| |||||||||||| ||||| ||||||| || |||||||||
Sbjct 3890 CTACAGCCTTTAACGATCTATTCCGTCAGATCGCGGCAGTGTCACTACTCCGTCCCCACA 3831
Query 189 TCACCCTCAAATGTAGTAACGGAATACTAACCGTTTCTGCCATCGG-TCTCGCCGTTCGG 247
|| | | | | |||| |||||| ||||| || | |||||| | || || |||||
Sbjct 3830 TCGCAGTTATAAAAAGTACTGGAATATTAACCAGTTGT-CCATCGAATATC-CCTTTCGG 3773
Query 248 CTGAACCTTATGACCCGACTTACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCT 307
| ||||| | ||||||| |||||||||||||||||| |||||||||||||||| ||
Sbjct 3772 GTTCTCCTTAGGTCCCGACTAACCCTGATCCGATTAGCGTTGATCAGGAAACCTTATCCT 3713
Query 308 TTCGGCGAGGGGGTTTC 324
||||| | | ||||||
Sbjct 3712 TTCGGTGGGCAGGTTTC 3696
>seq3
Length=3814
Score = 73.4 bits (80), Expect = 8e-11
Identities = 95/130 (73%), Gaps = 1/130 (1%)
Strand=Plus/Minus
Query 203 AGTAACGGAATACTAACCGTTTCTGCCATCGGTCTCGCCGTTCGGCTGAACCTTATGACC 262
|||| |||||| ||||| || | |||||| ||| ||| || ||||| | |
Sbjct 2002 AGTACAGGAATATTAACCTGTTTT-CCATCGACTACGCTTTTCAGCCTCGCCTTAGGGAC 1944
Query 263 CGACTTACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCTTTCGGCGAGGGGGTT 322
||||| |||||| |||||| || || ||||||||||| ||||||||||| ||| |||
Sbjct 1943 CGACTAACCCTGCGTCGATTAACGTTGCGCAGGAAACCTTGGTCTTTCGGCGTGGGTGTT 1884
Query 323 TCCCACCCCC 332
| ||| |||
Sbjct 1883 TTTCACACCC 1874
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 959865552000
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |