Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq4335 150 3e-34 seq133 141 1e-31 >seq4335 Length=212 Score = 150 bits (166), Expect = 3e-34 Identities = 165/212 (78%), Gaps = 7/212 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| |||||| |||||||||| | |||||| |||||| | Sbjct 207 GTACAAAGGGCAGGGACGTAATCAGCGCGAG-TTGATGACTCACACTTACTTGGAATT-C 150 Query 61 CTCGTTGA-AGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATT 119 |||||| | ||| || ||||||||| | ||||| ||||||| || |||| | || Sbjct 149 CTCGTTCACAGAA-AATAATTGCAATTTCCGATCCCAATCACGACAAACATTCACTGGTT 91 Query 120 ACCCGGAC-CTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 || | || ||| |||| | | | || ||| | ||||||||||||||||||| Sbjct 90 TACCAATCTCTTTCGAGAAAGG--AAACGCACGCTGACTTTATCAGTGTAGCGCGCGTGC 33 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTG 210 |||| | |||||||||||||||||||||||| Sbjct 32 AGCCCCGGACATCTAAGGGCATCACAGACCTG 1 >seq133 Length=18310 Score = 141 bits (156), Expect = 1e-31 Identities = 174/232 (75%), Gaps = 13/232 (6%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||| || | | |||| | ||||||| ||||||| | Sbjct 8513 GTACAAAGGGCAGGGACATATTCAGCGTAAAGTA-ATGATTTACGCTTACAAGGAATT-C 8570 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 |||||||| | | | |||| ||| || | |||||||| ||| || |||||| |||| Sbjct 8571 CTCGTTGATGTTCGATAATTACAAAGAACAATCCCCATTACGTAGAGTATTCAAATGATT 8630 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAA---TACATCAGTGTAGCGCGCGT 176 |||| |||| |||| | ||| | || || | ||||| |||| ||||||| Sbjct 8631 ACCCAAACCTTTCGGTCCAGG----AACCTTTTTCCACTTTACAT---TGTAACGCGCGT 8683 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 || ||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct 8684 GCAGCCCAAGGTATCTAAGGGCATCACAGACCTGTTATTGCCTCGAACTTCC 8735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751897973575