Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq2004 150 3e-34 seq133 73.4 7e-11 >seq2004 Length=1548 Score = 150 bits (166), Expect = 3e-34 Identities = 186/248 (75%), Gaps = 5/248 (2%) Strand=Plus/Minus Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTCGAATACATTAGCATG 131 |||||||||||| |||| | |||| ||||| ||||| ||| ||| | || || ||||| Sbjct 450 TTTTACTTTGAACAAATCAAAGTGCTCAAAACAGGCGTTTTGCTTGTATGTTTTTGCATG 391 Query 132 GAATAATAGAATAGGACGTGCGGTTCTA-TTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 ||||||||||||| ||| | |||| ||| |||| ||||||| || || |||||||| Sbjct 390 GAATAATAGAATAAGACTT-CGGT-CTAGTTTTATTGGTTTTATAGATCGTTGTAATGAT 333 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| || || | |||||| | ||||| || |||||||||||||||||| Sbjct 332 TAAAAGAGACAAACGGGGGCATTCGTATTGTTGCGTGAGAGGTGAAATTCTTGGACCGCA 273 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| |||| |||||||| || ||||| ||| ||||||||||| |||||||| Sbjct 272 GCAAGACGTCCTACAGCGAAAGCATTTGCCAAGCTTGTCTTCATTAATCA-AGAACGAAA 214 Query 311 GTTAGGGG 318 || || || Sbjct 213 GTCAGAGG 206 >seq133 Length=18310 Score = 73.4 bits (80), Expect = 7e-11 Identities = 98/135 (73%), Gaps = 1/135 (1%) Strand=Plus/Minus Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243 |||||||||||||||| | ||||| || |||| | | ||||||||||||| | Sbjct 9384 TAATGATTAATAGGGAAGGGCGGGGCCGTTCATATTGATGGGCGAGAGGTGAAATTCGTT 9325 Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303 || | |||| ||||| |||||||| ||| |||| | | | ||||||||| | Sbjct 9324 GACCCTATCAAGATGCACTACAGCGAAAGCATTCGGCAAGTACTTCTCCATTAATCA-AG 9266 Query 304 AACGAAAGTTAGGGG 318 |||||||||| |||| Sbjct 9265 AACGAAAGTTTGGGG 9251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915071826240