Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01001161.1 Length=375 Score E Sequences producing significant alignments: (Bits) Value seq45 383 4e-104 >seq45 Length=185997 Score = 383 bits (424), Expect = 4e-104 Identities = 321/375 (86%), Gaps = 15/375 (4%) Strand=Plus/Plus Query 1 GCGACGTAGAATGTTCGTTTCGGCAGGTCTTTCGCCAGCCGGAATCTTCGCTTGTAGCTT 60 |||||||||| ||| |||| |||||||||||| ||||||||||||||| ||| |||||| Sbjct 91011 GCGACGTAGA-TGT-CGTT-CGGCAGGTCTTT-GCCAGCCGGAATCTT-GCT-GTAGCT- 91063 Query 61 CATTCGGGCGTTGCCCCCGTTAATTCGGCCAAGAAACTTCGGCCGGATTGGCCTAAAAGT 120 |||| ||||||||||||||| | | ||||| | ||| | |||||||||||||||||||| Sbjct 91064 CATT-GGGCGTTGCCCCCGT--AGTTGGCCATGGAACAT-GGCCGGATTGGCCTAAAAGT 91119 Query 121 TGGCGGCGATTATAGGCACATTCTGGCGCCGATGCCATTGCGCCAGAACGTCGTACGGTC 180 ||||||||||||||||| |||||| |||||||||||| ||| |||| ||||||| || Sbjct 91120 -GGCGGCGATTATAGGCATATTCTGACGCCGATGCCAT-GCGTCAGA-CGTCGTAGGGCG 91176 Query 181 ATTCGTCTTTGCGGCTGATAACGCGGGTCGCTGGCTTGCAGTTGGTGCAGGCGGGCCAGG 240 || | | || || |||||| ||| ||||| ||| ||||||||||||||||| |||||| Sbjct 91177 CTTGG-CGTTCCGTCTGATACCGCACGTCGCCGGCCTGCAGTTGGTGCAGGCGCGCCAGG 91235 Query 241 GTGTCCTGGCGATAAAAGCGGCTGAGTTGGGCGTACACCTGTGGATAACGATTGACCAGT 300 | ||||| || || ||| |||| ||||| |||||||||||||||||| |||||||| Sbjct 91236 GGATCCTGACGGTAGAAGTGGCTCAGTTGCTCGTACACCTGTGGATAACTGCTGACCAGT 91295 Query 301 AAATCCGGGGCGCTGAAAAAGTATTCGCTGGTGACGGCAAAGAACTCCGCCGGGTTTTCG 360 ||||||||||| ||||| || |||||||||||||||||||||||||| ||||||||||| Sbjct 91296 AAATCCGGGGCACTGAAGAAATATTCGCTGGTGACGGCAAAGAACTCGGCCGGGTTTTCC 91355 Query 361 GCGGCGTAGGGGTCG 375 ||||||||||||||| Sbjct 91356 GCGGCGTAGGGGTCG 91370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1097446281120