Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01001187.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq430 295 1e-77 seq2338 113 7e-23 >seq430 Length=66805 Score = 295 bits (326), Expect = 1e-77 Identities = 209/238 (88%), Gaps = 1/238 (0%) Strand=Plus/Minus Query 3 AGGCGCAAGCGGTACAGGCGACGCTTGAGCTTTGCCCAGGTACTGCATGCGCGCGACGAT 62 |||| || ||| ||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct 18917 AGGCTCAGGCGATACAGGCGACGCTTGAG-TTTGCCCAAATACTGCATGCGCGCGACGAT 18859 Query 63 TTCCTGGCCGGTGTAGCAGCCTTTCTTGAAGCTGACGCCGCCGACGGCCTGCAGGTTGAG 122 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 18858 TTCCTGGCCGGTGTAGCAGCCTTTCTTGAAGCTGACGCCGCCGACGGCTTGCAGGTTGAG 18799 Query 123 CATTTGCGGGATGAACAGCTCGCGGGTTTGCGCCATGACCTGGCCGATGCCGGCGCGGGT 182 ||| |||||||||||||| |||||||| || | ||||||||||||||| ||||| ||| | Sbjct 18798 CATCTGCGGGATGAACAGTTCGCGGGTCTGGGGCATGACCTGGCCGATACCGGCACGGAT 18739 Query 183 CTGGCCCAGCAGCCATTCGTTCAGACCTGCTTCTTTAAGCTGTGCAGTCAATTGGCTG 240 ||||||||||||||||| |||||| | |||| | | ||||| | | ||||||| Sbjct 18738 CTGGCCCAGCAGCCATTGGTTCAGTTCACCTTCGTGCAATTGTGCGGCGAGTTGGCTG 18681 >seq2338 Length=17329 Score = 113 bits (124), Expect = 7e-23 Identities = 120/157 (76%), Gaps = 1/157 (1%) Strand=Plus/Plus Query 20 GCGACGCTTGAGCTTTGCCCAGGTACTGCATGCGCGCGACGATTTCCTGGCCGGTGTAGC 79 ||||||||||||||| |||||||||||| |||| ||||||||||||||||| | |||| Sbjct 15501 GCGACGCTTGAGCTT-GCCCAGGTACTGGCTGCGGGCGACGATTTCCTGGCCCGGATAGC 15559 Query 80 AGCCTTTCTTGAAGCTGACGCCGCCGACGGCCTGCAGGTTGAGCATTTGCGGGATGAACA 139 ||||||||||||| |||||||||| | || | |||| ||| ||||| | ||| Sbjct 15560 AGCCTTTCTTGAAATTGACGCCGCCCAGCAGCTCGAAATTGACCATCTGCGGCACGAATT 15619 Query 140 GCTCGCGGGTTTGCGCCATGACCTGGCCGATGCCGGC 176 |||| | || ||| ||| ||| |||||| || Sbjct 15620 GCTCCTGCGTGGCGGCCGTGATCTGCGGGATGCCCGC 15656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735900144350