Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01001197.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq224 143 4e-32 >seq224 Length=95911 Score = 143 bits (158), Expect = 4e-32 Identities = 200/272 (74%), Gaps = 9/272 (3%) Strand=Plus/Plus Query 10 CCCGGCGGCTTGCGCCAGTTCGCCACAGGCCACGCTCGGTGGCTTTCTTGCGCCAGGCTG 69 |||| || | || ||||| | |||| |||||||||||||| || | || |||||||| | Sbjct 86211 CCCGCCGCCATG-GCCAGCT-GCCAAAGGCCACGCTCGGTAGCCTCCT-GCGCCAGGGTC 86267 Query 70 ACGTGGGCAAATCCGCAAAGGGCGAGGGCGCGTTGATAGCGGGCGCAAAGTGCAGCAGCG 129 ||||||| || || || || ||| || || || ||||||| ||| ||| | | | Sbjct 86268 ACGTGGGGGAAGCCACAGAGTTGGAGTGCACGCTGGTAGCGGGTGCAGAGTTGGGGTGTG 86327 Query 130 CCGACCAGGATGA--TCG-GCTGATGTTTGGCC--GAATCTG-GCAAGCCGGCGAGCTCA 183 |||||||||| || ||| |||| || |||| | | || ||| ||||| || || Sbjct 86328 CCGACCAGGACGATGTCGCGCTGCTGGTTGGGCTTGCGAGTGCGCAGGCCGGTCAGTTCG 86387 Query 184 TGGCCGATGAGCAGGCCAGACAGGTAATCGGGTTGCTGGTCGGGCGCCAGCTGCGCGGTC 243 |||||||| | ||| || ||||| || || ||||||| ||| |||||||||| ||||| Sbjct 86388 TGGCCGATCAACAGCCCGGACAGATAGTCCGGTTGCTCGTCAGGCGCCAGCTCGCCGGTC 86447 Query 244 AGCCCAAGGGTACGGGCACTGAACAGGGTCGA 275 | || |||| || |||||||||| | |||| Sbjct 86448 AATCCCAGGGAGCGTGCACTGAACAAGTTCGA 86479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780694066180