Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01001277.1 Length=476 Score E Sequences producing significant alignments: (Bits) Value seq366 697 0.0 >seq366 Length=79101 Score = 697 bits (772), Expect = 0.0 Identities = 439/474 (93%), Gaps = 0/474 (0%) Strand=Plus/Plus Query 1 CGACCCGCTGCAAGACGGCACCGACCTGCTGTTTCGCATCGGCGTGCTGAACGATTCCGG 60 ||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct 24858 CGACCCGTTGCAAGACGGCACAGACCTGCTGTTTCGCATCGGTGTGCTGAACGATTCCGG 24917 Query 61 CATGCAAGCGCGAATCTTCGCCCCGCAGCGCCTCCGCCTTGCGGCCAGCCCCGGCTACCT 120 |||||| ||||||||||||||||| |||||| | || || || |||||||||||||| || Sbjct 24918 CATGCAGGCGCGAATCTTCGCCCCCCAGCGCTTTCGTCTCGCTGCCAGCCCCGGCTATCT 24977 Query 121 GGAACGTTTCGGTACGCCGCGCCATCCGGACGAACTGGTGAACCACCAGTGCCTGGCCTA 180 ||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 24978 GGAGCGTTTCGGTACGCCCCGGCATCCGGACGAACTGGTGAACCACCAGTGCCTGGCCTA 25037 Query 181 CAAGGGTGTCACCGGCCAACAACGCTGGTTCTTCCGCCGCGACCAGGACGACTGGACGTC 240 |||||| ||||||||||| || ||||||||||||||||| ||||||| |||||||||||| Sbjct 25038 CAAGGGCGTCACCGGCCAGCAGCGCTGGTTCTTCCGCCGGGACCAGGGCGACTGGACGTC 25097 Query 241 CTACAGCGTCAAGGGCCCGATCACCGGCAACCACGCCGACACTCTGACCCACGCCGCCGA 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 25098 CTACAGCGTCAAGGGCCCGATCACCGGCAACCACGCCGACACCCTGACCCACGCTGCCGA 25157 Query 301 GCAAGGCCTGGGGCTGGTGGTGTTTCCATCTTGGTTGATCGGCGAAGGGCTGCGTGCCGG 360 ||||||||||||||||||||||| || || ||||||||||| ||||| ||||| ||||| Sbjct 25158 ACAAGGCCTGGGGCTGGTGGTGTTCCCGTCATGGTTGATCGGTGAAGGCCTGCGCGCCGG 25217 Query 361 CACGCTGCAGGCGGTGCTGACCGACTACGAAGTGGCGACGACCCTGGAGCCGCAACAGAT 420 |||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||| Sbjct 25218 CACGCTGCAGGCGGTGCTCAGCGACTATGAAGTGGCGACGACCCTGGAGCCGCAACAGAT 25277 Query 421 TGCGGCGCTGTGGCCGGGTAGTCGGCGGTTGTCGTTGAAGGTGCGGACGGTGAT 474 ||| ||||||||||||||||| |||||| ||||||||||||||||||| ||||| Sbjct 25278 TGCTGCGCTGTGGCCGGGTAGCCGGCGGCTGTCGTTGAAGGTGCGGACCGTGAT 25331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1420601016960