Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01001280.1 Length=614 Score E Sequences producing significant alignments: (Bits) Value seq685 1058 0.0 >seq685 Length=77197 Score = 1058 bits (1172), Expect = 0.0 Identities = 605/614 (99%), Gaps = 4/614 (1%) Strand=Plus/Plus Query 1 TCGAGCGAGGCGAAGTCGGGGGCCGGTTTCCCGCGCTTTCTTTCAGCCGGAAGCTTTCGG 60 |||||||||||||||||||||||||||| || |||||| ||||||||||||||| ||| Sbjct 33616 TCGAGCGAGGCGAAGTCGGGGGCCGGTT-CCTGCGCTTC--TTCAGCCGGAAGCTT-CGG 33671 Query 61 CGGTCGCGGCTCGGCGCCCGGGCGAACCAGAGGGGTACTGAACTGGTTCGCCAGGTAGGT 120 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 33672 CGGTTGCGGCTCGGCGCCCGGGCGAACCAGAGGGGTACTGAACTGGTTCGCCAGGTAGGT 33731 Query 121 GCCCGGTTCGTCGGCGAGGATGTTGAACGGCGAGAAGCCGGAGATCGTGTCGGTGCGAGC 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 33732 GCCCGGTTCGTCGGCGAGGATGTTGAACGGCGAGAAGCCGGAGATCGTGTCGGTGCGAGC 33791 Query 181 GATGCCGGGGAGGATGACCTTGCTGAACAGGTTTGCCTGTTCACCGAAAATCATTTCGTA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 33792 GATGCCGGGGAGGATGACCTTGCTGAACAGGTTTGCCTGTTCACCGAAAATCATTTCGTA 33851 Query 241 GCGCTGGGTGCGACCGGCCTTCACCTCGCTGATCAGCTTGAACGCTGCGTTGTTGTCCTG 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 33852 GCGCTGGGTGCGACCGGCCTTCACCTCGCTGATCAGCTTGAACGCTGCGTTGTTGTCCTG 33911 Query 301 CGTCGGATCGCCGGCGTAGTTCATGCGGTAGCCGGGAATGCTTTCCACACGCACGTCGCC 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 33912 CGTCGGATCGCCGGCGTAGTTCATGCGGTAGCCGGGAATGCTTTCCACACGCACGTCGCC 33971 Query 361 ATTGACCAGGCCGGCGAACAGGTCGTCGTTCGGGATGCCCTTGAAGATGTTATTCTTGAA 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 33972 ATTGACCAGGCCGGCGAACAGGTCGTCGTTCGGGATGCCCTTGAAGATGTTGTTCTTGAA 34031 Query 421 CATATCTTCCAGGGTTTTCTCGGTGTCGGGCACGTACTCGTCACCGTCGCGCTTGAAGCC 480 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 34032 CAGATCTTCCAGGGTTTTCTCGGTGTCGGGCACGTACTCGTCACCGTCGCGCTTGAAGCC 34091 Query 481 GACGTACACAGCACGAGTCAGTACATCTTCACCATCAGTCACCCGCAGCAGCGCGAGCGC 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 34092 GACGTACACAGCACGAGTCAGTACATCTTCACCATCAGTCACCCGCAGCAGCGCGAGCGC 34151 Query 541 CTTGGTGCCACGGCCGAGTTGTTCGGCGAGGACTTCTTCCAGATCCTGGCGGCTGCGCAC 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 34152 CTTGGTGCCACGGCCGAGTTGTTCGGCGAGGACTTCTTCCAGATCCTGGCGGCTGCGCAC 34211 Query 601 ATTGCGGGCGTTCG 614 |||||||||||||| Sbjct 34212 ATTGCGGGCGTTCG 34225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1858931482135