Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01001286.1 Length=411 Score E Sequences producing significant alignments: (Bits) Value seq29 540 2e-151 >seq29 Length=371730 Score = 540 bits (598), Expect = 2e-151 Identities = 331/352 (94%), Gaps = 0/352 (0%) Strand=Plus/Minus Query 60 GTCATAAGGGTCCACGCCGTCCTTGACCACCAGGATGTCTTCCATGATCAGGTATTGCAG 119 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 137831 GTCATAAGGGTCTACGCCGTCCTTGACCACCAGGATGTCTTCCATGATCAAGTACTGCAG 137772 Query 120 GTCGGAGCCAAAGAACATGTCCAGCGCGTCTTTCGGCGAGCAGATCATCGCTTCGCCACG 179 |||||| || |||||||||| |||||| || |||||||||||||||||||||| ||||| Sbjct 137771 GTCGGAACCGAAGAACATGTTCAGCGCATCAGTCGGCGAGCAGATCATCGCTTCACCACG 137712 Query 180 GCGGTTGAGCGAGGTGTTCAGGGACACGCCGTTGCCGGTCAGCACTTCCAGCTCTTTCAT 239 |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct 137711 ACGGTTGAGCGAGGTGTTCAGCGACACGCCGTTGCCGGTCAACACTTCCAGCTCTTTCAT 137652 Query 240 CATGTCGTAGTAGCGCGGGTTGTATTCGCGCTTGAGCACCTGGGCGCGGGAGGTGCCATC 299 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||| Sbjct 137651 CATGTCGTAGTAGCGCGGGTTGTATTCGCGCTTGAGCACTTGGGCACGGGAGGTACCATC 137592 Query 300 TTCATGGACCACTTCCGGCACGCGGGTCTTCCACTCTTCCGACACTTCAAAGGTGAAGGT 359 ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct 137591 TTCATGGACCACTTCCGGCACGCGGGTTTTCCACTCTTCCGACACTTCAAAAGTGAAGGT 137532 Query 360 CATGAACGGCGCCGGGTGATCGACCTTGATCATCTGCGGGGCCACGGTGTCG 411 |||||||||||||||||||||||||||||||||||| || || ||||||||| Sbjct 137531 CATGAACGGCGCCGGGTGATCGACCTTGATCATCTGTGGCGCAACGGTGTCG 137480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1212630147360